| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2528 |
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| Symbol | |
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| ID | 3968755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3200801 |
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| End bp | 3201292 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921621 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_528000 |
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| Protein GI | 90022173 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000000139934 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAACA TTAAAACCTT ATTGTCGTTA GTAGCAGTAT TTGCTTTTGT TTCTGGTTGT
AGCAGTACCG GTAAAACTAA AGGCGAAGCT GACACTGATA TGAACAACAC AGTGGAAGAG
CAAGTAGAAA CTGTAGTTGA AGTAGCTGAT CCACGTGACG CGCTTATTGG CGTAGACACT
GTATTCTACT TTGACTTCGA CCAAGCAATG TTGCGTTCCG AAGCGCGCGC TGCTTTGTTG
ATTCACGCTA AAGTGATCAA AGAAACTAAC GCTTCTATCC GTTTGGAAGG TCATGCTGAT
GAGCGTGGTT CACGCGAGTA CAACATGGCT CTTGGCGAGC GTCGTGCTAA TGCAGTTCGT
GACTTCTTAG TACTTCAAGG TGTGCCAAGC TACTCAATCG AAACTGTTAG CTACGGTGAA
GAGCGTGCAG CACAAGTTGG CAGCAACGAA AGCGCATGGT CTAAAAACCG TCGTGTAGAA
ATCAAATACT AA
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| Protein sequence | MSNIKTLLSL VAVFAFVSGC SSTGKTKGEA DTDMNNTVEE QVETVVEVAD PRDALIGVDT
VFYFDFDQAM LRSEARAALL IHAKVIKETN ASIRLEGHAD ERGSREYNMA LGERRANAVR
DFLVLQGVPS YSIETVSYGE ERAAQVGSNE SAWSKNRRVE IKY
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