| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2523 |
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| Symbol | |
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| ID | 3968748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3194891 |
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| End bp | 3196438 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921614 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_527995 |
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| Protein GI | 90022168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.735275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAG ATAAGCTTGT TATTTTCGAT ACAACATTGC GGGATGGCGA ACAAAGCCCC
GGCGCTTCCA TGACGCAGGA AGAAAAAATT CGCATTGCCA AAATGTTGGA AAAAATGCGT
GTAGACGTCA TTGAAGCAGG CTTTGCGATC GCAAGCCCAG GTGATTTTGC AGCAGTAAAA
GCCGTGGCAG AAGCGGTAAA AGATTCACGC GTATGCAGCT TGGCACGCGC TTTAGATGGC
GATATAGACA GAGCGGCAGA GGCATTGAAG GGCGCGAATG CATCGCGTAT CCACACTTTT
ATTGCCACAT CGCCTATTCA TATGAAGCAT AAGCTGAAGA TGGAGCCCGA TGCGGTGTTG
GCGCAAGCTA TTCACGCCGT AAAGCGCGCA CGAAGCTATA CCGATGATGT GGAGTTCTCG
TTAGAGGACG GCAGTCGCTC TGAGTTTGAT TTTATGTGTC GTATAACCGA AGCGGCAATT
GCTGCCGGTG CACGTACTAT CAATGTGCCC GATACAGTTG GCTACGGTGA GCCGGGTGAG
TACGGCGCAA TGTTCAAGCG CTTAATTGAA GCGGTTCCAA ATTCTGATTT GGCCATTTTC
TCTACCCATT GTCACAACGA CTTGGGCTTG GCTGTGGCTA ATTCTTTGTC TGCTGTAATG
AACGGCGTGC GCCAAATCGA ATGTACCATT AATGGTTTGG GGGAGCGTGC AGGTAACGCC
GCGTTAGAAG AGGTTGTAAT GGCCGTGCGC ACACGCAAAG ACCTATTCCC AGTAGAAACC
AATATTGTTA CAGAGCACAT AGTGCCTACC TCGCGCTTGG TATCCACAAT TACCGGTTTT
CCTGTTCAGC CCAACAAAGC CATTGTTGGC GCTAATGCGT TTGCGCATGA GTCTGGTATA
CATCAGGATG GTGTACTTAA GCATCGGGAA ACCTATGAAA TTATGCGCGC GGAAGATGTG
GGCTGGAATA CCAATAAAAT TGTATTAGGT AAGCACTCTG GCCGCGCTGC TGTAAAAGCG
CGATTTGAAG ATTTAGGTAT TACATTTGAT ACCCCAGAGG CGTTAAGCGA AGCGTTTGCA
CGCTTTAAGG CGCTCGCTGA TAAAAAACAC GAAATTTTTG ACCAAGACTT ACAGGCGTTA
GTGTCTGAAG CAGATAATGC TAGCCGTGAA GAAAAGTACA AGCTAGTGGC TTTAGAGGTA
GTGTGTAAAA CCGGTCAGAA CCCCCATGCG CAACTTACGT TAAGTATTGG CGGTGAGTTG
GTAGAGGCAA GCTCCGAAGG TGGTGGCCCG GTAGATGCGG CCTATAAGGC CATTGAAAGC
GTGGTAAATA GCCATACAGA CCTTTTACTT TACTCGGTGA ATAATATCAC TCAGGGCACA
GACTCTCAGG GTGAGGTGAC GGTGCGGTTG GAGCGCAATG GCAATATTGT AAATGGCATA
GGTGCCGATA CCGATATTGT GACAGCTTCT ATTAAATCCT ATTTGGATGC CTTGAACCTG
CTCGAATCTA ATAAATCCCG CGCGCACCCT CAGCGTGAAG GGGTATGA
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| Protein sequence | MQKDKLVIFD TTLRDGEQSP GASMTQEEKI RIAKMLEKMR VDVIEAGFAI ASPGDFAAVK
AVAEAVKDSR VCSLARALDG DIDRAAEALK GANASRIHTF IATSPIHMKH KLKMEPDAVL
AQAIHAVKRA RSYTDDVEFS LEDGSRSEFD FMCRITEAAI AAGARTINVP DTVGYGEPGE
YGAMFKRLIE AVPNSDLAIF STHCHNDLGL AVANSLSAVM NGVRQIECTI NGLGERAGNA
ALEEVVMAVR TRKDLFPVET NIVTEHIVPT SRLVSTITGF PVQPNKAIVG ANAFAHESGI
HQDGVLKHRE TYEIMRAEDV GWNTNKIVLG KHSGRAAVKA RFEDLGITFD TPEALSEAFA
RFKALADKKH EIFDQDLQAL VSEADNASRE EKYKLVALEV VCKTGQNPHA QLTLSIGGEL
VEASSEGGGP VDAAYKAIES VVNSHTDLLL YSVNNITQGT DSQGEVTVRL ERNGNIVNGI
GADTDIVTAS IKSYLDALNL LESNKSRAHP QREGV
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