Gene Sde_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2517 
Symbol 
ID3968799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3188855 
End bp3189940 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content44% 
IMG OID637921608 
Producthypothetical protein 
Protein accessionYP_527989 
Protein GI90022162 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTC AATCACCAAT CGCTCGGTTT TTACTCGTGG CGGCTACGTT TGTTATTGTT 
GTTGCCGGTA TGCGCGCTGC AGAATCTATA CTTGTCCCGT TTCTTTTATC TTTATTTATT
GCCGTAATAG CAACCCCGCC GCTTATTTGG ATGCAGCGCA AAGGCGTGCC GTCGAGTATT
GCTATGCTGT TGGTTATTTG CAGTATTGTG ATTGGCGGCA TTCTTATTGG GGTAATTGTT
GGTGCCTCGA TTGCTGATTT CCGTCAAGAT TTACCTGGTT ATCAACAACG CTTAACCGTG
CTCACGGCAG ACTTTTTTGT ACAGCTACAA GCTTTGGGTA TAGATGTAGA GCTTGGCCAT
TTGCGAGAAA GCTTTAACCC ATCGGCGGCG TTATCGCTAG CTGGCAACAC CTTGGCGCAG
TTTGGCAATA TGATGACCAA CGCGTTTTTA ATTTTGTTGC TTGTGGTTTT TATTCTCGCA
GAAGAAGTGG GGTTTAGAGA CAAAATAAAA TACTCGTTTA AAACGCCAGA AAAAACACTT
GCCGCTATAG AGAAATTCAC CTCGGGTGTT AACCAATACG TAGCAATTAA AACCACCATG
AGTGCGCTAA CCGGCCTTAT TATTATGTGC TGGTTGTGGT TTATGAAATT AGAATATTTC
GTGTTGTGGG GCTTGCTGGC ATTTTTACTT AATTACGTGC CTACGTTTGG CTCCATTTTG
GCCGCTGTAC CCGCTGTGCT ACTTGCACTT GTACAGCTTG GGGTAGGTGA TGCGTTGTTA
GTGGGCGCAG CTTACCTTGC TGTGAATTTT GTTGTAGGTA ATGTAATAGA GCCGCGAGTG
ATGGGTAAGG GGTTAGATTT ATCTGCGCTG GTAGTATTTT TATCGTTAGT GTTTTGGGGA
TGGGTGCTTG GGCCAATTGG CATGTTGCTT TCAATACCGT TAACCATGAC CGTTAAAATT
GCCTTAGAAA GCTTTGAAGA TACTCGTTGG TTGGGTGTGA TGTTAGGTTC GGGCAGTGGT
TTATCCGATA GGGTGGTAGA CGATGGAGAA TCTATATTGC CAATTGGGTT TTCAAAGGAT
AAATAA
 
Protein sequence
MEVQSPIARF LLVAATFVIV VAGMRAAESI LVPFLLSLFI AVIATPPLIW MQRKGVPSSI 
AMLLVICSIV IGGILIGVIV GASIADFRQD LPGYQQRLTV LTADFFVQLQ ALGIDVELGH
LRESFNPSAA LSLAGNTLAQ FGNMMTNAFL ILLLVVFILA EEVGFRDKIK YSFKTPEKTL
AAIEKFTSGV NQYVAIKTTM SALTGLIIMC WLWFMKLEYF VLWGLLAFLL NYVPTFGSIL
AAVPAVLLAL VQLGVGDALL VGAAYLAVNF VVGNVIEPRV MGKGLDLSAL VVFLSLVFWG
WVLGPIGMLL SIPLTMTVKI ALESFEDTRW LGVMLGSGSG LSDRVVDDGE SILPIGFSKD
K