Gene Sde_2511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2511 
Symbol 
ID3968793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3181507 
End bp3182199 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content48% 
IMG OID637921602 
Productacetolactate synthase large subunit biosynthetic type 
Protein accessionYP_527983 
Protein GI90022156 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.108981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCC ACCCTTTAAA TCGTTATCCG CGGGAATCAC TCGACACACT GCTCTCAGCA 
GTACCGTTTT ATAAGGCCAT AAAACAGCGT GATCAGTGGC AGTACGATTT ACTGATGAAT
TACTCGAAAA TTATAGAGTA CCGCCCAGGG GAGGTATTGT TAGAGCAGGG CCATAAAGAC
CAGTGGCTTT ACTTTTTATT AAAGGGCCAA TTGGCAGTGT TGGTTGGCAA GCCTAATGAA
ACAGCCAAAG TGGTGAACTA TATAACGCCT GGCGAGGTGT TTGGCGACTT AGCAGCACTT
ATGGATTACG AGCGTACAGC AACGGTGGTT GCCGATACAA ATAGTAAGCG AGTGCTAGTG
TTTGGCACAG ATTTTCAGGT GTTCGGCGAG CTGAAGGACA CGCGCAAGGT ATCGCTGGCA
ACTAAGCTAG AATACTTCCG CAACATGGTG CACAACCTGC GTTGGAAGTT AGAGGTGTAC
CGCATGTCTT ACCCCGACCA GCCGTTTTCT ACAAGCCATC GCAAAGTAAA GCTGTATATG
GGGCAAAAGG ACTGCATGGA TGAGCTCGAA GCTTTAGATC AGCAGGCGCG TGCACTGGCG
CGCTTGCTGG TTAATTGGAA TACAGAGTTT GATCGTTTGG CCATTAAGCC TTCTGTGTCG
CTCGACTACA GTTCTCTGGC CGCTTTAGGG TAA
 
Protein sequence
MEIHPLNRYP RESLDTLLSA VPFYKAIKQR DQWQYDLLMN YSKIIEYRPG EVLLEQGHKD 
QWLYFLLKGQ LAVLVGKPNE TAKVVNYITP GEVFGDLAAL MDYERTATVV ADTNSKRVLV
FGTDFQVFGE LKDTRKVSLA TKLEYFRNMV HNLRWKLEVY RMSYPDQPFS TSHRKVKLYM
GQKDCMDELE ALDQQARALA RLLVNWNTEF DRLAIKPSVS LDYSSLAALG