| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2506 |
|---|
| Symbol | |
|---|
| ID | 3968788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 3176937 |
|---|
| End bp | 3177674 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637921597 |
|---|
| Product | acetohydroxy acid isomeroreductase |
|---|
| Protein accession | YP_527978 |
|---|
| Protein GI | 90022151 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4111] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0206114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA ACCTAGATAA AGCACCCAGC AAAGAAAGCT ATTACCAACC CTCATGCAGC
TCTAGCAATG TTATTAAAGA AGTGTCCATC GACTGTGTGG TTTTTGGCTT GAATAATGGC
GAGTTAGAGG TGTTGGTTGT TCGCCACGGC GAAGGTATTA GCAAAGGTGG CTGGGCACTG
CCGGGTGGGT TTATTTTAGT CGATGAAGAC CTAGATGCAG CGGCATCTCG CCTCCTTAAA
GATTTAACCG GCTTAGATAA TATTTACCTA GAGCAACTGC AAGCCTTTGG TGGTGTAGAC
CGCTTCCCCG GGGAGCGCGT GGTTACTATC GCCTACTATG CATTGGTGCG TGCAGAAGAT
TACAATTTGA TTGCCGGTTT TACCGCATCG CACGTTGAAT GGCAGAAAGT TAGCCAGCGC
GAACACCTTA TATACGACCA TGACGAAATT TTAGAATTTG GCTTGGGCCG CTTAAAACAT
AAAGTTCAAC ACGAGCCTAT AGGTTTTAAC CTTTTACCAG AAAAATTTAC TCTTCTACAA
CTGCAAGAAT TGTACGAAGC CATATTGGAC GTAAAACTCG ATAAACCCAA CTTCCGCAGA
AAAATGACCA AAATGGGCTT ATTAGTACCC TGTAATGAAA AACAAAAAGA TGTACCGCAC
CGAGCCGCCG CACTGTACCG TTTTGATAAA GAAATATACG AGCAACTCAC TAAACAAGGC
TTTTCTTTCG AAGTGTAG
|
|---|
| Protein sequence | MSENLDKAPS KESYYQPSCS SSNVIKEVSI DCVVFGLNNG ELEVLVVRHG EGISKGGWAL
PGGFILVDED LDAAASRLLK DLTGLDNIYL EQLQAFGGVD RFPGERVVTI AYYALVRAED
YNLIAGFTAS HVEWQKVSQR EHLIYDHDEI LEFGLGRLKH KVQHEPIGFN LLPEKFTLLQ
LQELYEAILD VKLDKPNFRR KMTKMGLLVP CNEKQKDVPH RAAALYRFDK EIYEQLTKQG
FSFEV
|
|---|
| |