Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2506 |
Symbol | |
ID | 3968788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3176937 |
End bp | 3177674 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637921597 |
Product | acetohydroxy acid isomeroreductase |
Protein accession | YP_527978 |
Protein GI | 90022151 |
COG category | [R] General function prediction only |
COG ID | [COG4111] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0206114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA ACCTAGATAA AGCACCCAGC AAAGAAAGCT ATTACCAACC CTCATGCAGC TCTAGCAATG TTATTAAAGA AGTGTCCATC GACTGTGTGG TTTTTGGCTT GAATAATGGC GAGTTAGAGG TGTTGGTTGT TCGCCACGGC GAAGGTATTA GCAAAGGTGG CTGGGCACTG CCGGGTGGGT TTATTTTAGT CGATGAAGAC CTAGATGCAG CGGCATCTCG CCTCCTTAAA GATTTAACCG GCTTAGATAA TATTTACCTA GAGCAACTGC AAGCCTTTGG TGGTGTAGAC CGCTTCCCCG GGGAGCGCGT GGTTACTATC GCCTACTATG CATTGGTGCG TGCAGAAGAT TACAATTTGA TTGCCGGTTT TACCGCATCG CACGTTGAAT GGCAGAAAGT TAGCCAGCGC GAACACCTTA TATACGACCA TGACGAAATT TTAGAATTTG GCTTGGGCCG CTTAAAACAT AAAGTTCAAC ACGAGCCTAT AGGTTTTAAC CTTTTACCAG AAAAATTTAC TCTTCTACAA CTGCAAGAAT TGTACGAAGC CATATTGGAC GTAAAACTCG ATAAACCCAA CTTCCGCAGA AAAATGACCA AAATGGGCTT ATTAGTACCC TGTAATGAAA AACAAAAAGA TGTACCGCAC CGAGCCGCCG CACTGTACCG TTTTGATAAA GAAATATACG AGCAACTCAC TAAACAAGGC TTTTCTTTCG AAGTGTAG
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Protein sequence | MSENLDKAPS KESYYQPSCS SSNVIKEVSI DCVVFGLNNG ELEVLVVRHG EGISKGGWAL PGGFILVDED LDAAASRLLK DLTGLDNIYL EQLQAFGGVD RFPGERVVTI AYYALVRAED YNLIAGFTAS HVEWQKVSQR EHLIYDHDEI LEFGLGRLKH KVQHEPIGFN LLPEKFTLLQ LQELYEAILD VKLDKPNFRR KMTKMGLLVP CNEKQKDVPH RAAALYRFDK EIYEQLTKQG FSFEV
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