| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2501 |
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| Symbol | |
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| ID | 3968783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3165702 |
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| End bp | 3167411 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921592 |
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| Product | DNA recombination protein, RuvA |
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| Protein accession | YP_527973 |
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| Protein GI | 90022146 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00226374 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAATTA ATCGGTTAAT AAAATTAGCA ATCTTTTCAA TCTCTCTCGT CTCGCTGTTA
GGTGCGAGTT CTGTGTGGGC TGCGAAAGGG GCAATGCCAG AGTTGGTGAA TAAAAATGGG
CGCTTTGCCT TAATGGTAGA TGGCGAGCCT TTTCTAATAT TAGGTGCACA AACTAATAAC
TCGGCAAACT ATGTAGCGGC GCTAAAAGAC GTGTGGCCGG TATACGAAAA AATGAACGCA
AATACGCTTG TTATTCCAGT CGCATGGGAG CAAGTAGAGC CGCAAGAGGG CGAATTCGAC
TTTTCATTCG TCGACGAATT ACTAAAACAG TCGCGTAAGA ACGATGCGCG ATTAGTGTTG
CTATGGTTTG CAACATGGAA AAACAACGCG CCGCACTATG CGCCAGCGTG GGTGAAGTTG
GATGATAAAC GCTTTCCGCG AGTAATAAAG CAGGATGGCG ATACACTAAA CTCGCTTTCG
CCTATACACC GCTCTACCTT AGAGGCCGAT AAAAAGGCGT TCACAAAATT AATGGCTCAC
CTTAAAAAGG TAGATAAGCA GCGCACCGTA ATTATGGTGC AGGTAGAAAA CGAGGTAGGT
ACCTATGGCG CTGCCCGCGA TTATTCTAAG GCTGCGCAAA AAGTGTTTAA TGCTCCGGTT
CCAGCCAAGC TGGTAAACGA CTTGAATGTG CCAGCAGGTA CATGGCCTGA GGTGTTTGGT
AGCGATGCCG ATGAGTTTTT TCATGCCTAC CATATAGCGG CATATGTAAA TGAAATTGCC
GAAGCAGGTA AAAAAACATA CAACCTGCCG TTGTACGTCA ATGTTGCACT GCGCAACCCG
TTCAACCCTG GTAAACCCGG GCAATATTCC AGCGGCGGCC CCACCGACAA CGTACTCGAT
ATTTGGAAGT CGGCCGGTGA GAGTATCGAT CTAATCGCAC CAGATATTTA TTTCCGCGAT
CACAAAACCG TAACTAAAGT GTTGGATTTA TACGCGCGTG AAGATAACGC CTTATATGTG
GCAGAAATTG GCAACGACCA ACCTTTTGCT CGTTTTTTTT GGGATACCCT AGGCCGTAAC
GGAATTGGCT TTGCGCCATT TGGAATGGAC TATACCGATT ACTACAACTA CCCATTAGGT
GCACAGAATA TGAGTGATGA AACCATCGCT CATTTCGGCG AGCTATACGG GTTATTTAAG
CCTATGACAA AGGCGTGGGC CAAAATAAGT TTTGAGCATA AAGTGTGGGG CGTATCGGAA
CCTGTAGACA GTCAAGCGGC CAACGCCAAA ATATGGAATG CCGAAGCTTC AACGCCAGAC
GAAGCAAAAC AAGCGATAGG CGAGAGCTAT ACCCAAACCT TAGATTTAGG CAAGTGGGAT
GCTGAAATAA CTTACGGTCG CCCCATGTTT TGGATAGAGC CGCCGGTTGG CAATAATCCA
GCATCTGGCG GTGCGGTTAT AGCGCAGCTA GGTGAAGATG AGTTTTTAGT AACTGGTTAT
CGCGCTAGGG TTACCTTTAA TCCTTCGCAG GAAATTAAAA ATAGTAAACA TATGATTGTG
CGGGTTGAAG AAGGTCACTT TGATAACAAC GGAAAGTGGG TTTTTGAGCG AGTATGGAAC
GGTGACCAAA CCGATTGGGG GTTGAATTTC ACTTCAAATA AGCACGTATT AAAAGTAAAA
CTTGCTACCT ATGTGGCGGG TGAGCGGTAA
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| Protein sequence | MVINRLIKLA IFSISLVSLL GASSVWAAKG AMPELVNKNG RFALMVDGEP FLILGAQTNN
SANYVAALKD VWPVYEKMNA NTLVIPVAWE QVEPQEGEFD FSFVDELLKQ SRKNDARLVL
LWFATWKNNA PHYAPAWVKL DDKRFPRVIK QDGDTLNSLS PIHRSTLEAD KKAFTKLMAH
LKKVDKQRTV IMVQVENEVG TYGAARDYSK AAQKVFNAPV PAKLVNDLNV PAGTWPEVFG
SDADEFFHAY HIAAYVNEIA EAGKKTYNLP LYVNVALRNP FNPGKPGQYS SGGPTDNVLD
IWKSAGESID LIAPDIYFRD HKTVTKVLDL YAREDNALYV AEIGNDQPFA RFFWDTLGRN
GIGFAPFGMD YTDYYNYPLG AQNMSDETIA HFGELYGLFK PMTKAWAKIS FEHKVWGVSE
PVDSQAANAK IWNAEASTPD EAKQAIGESY TQTLDLGKWD AEITYGRPMF WIEPPVGNNP
ASGGAVIAQL GEDEFLVTGY RARVTFNPSQ EIKNSKHMIV RVEEGHFDNN GKWVFERVWN
GDQTDWGLNF TSNKHVLKVK LATYVAGER
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