| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2486 |
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| Symbol | |
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| ID | 3968563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3138419 |
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| End bp | 3139264 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921577 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_527958 |
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| Protein GI | 90022131 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000106424 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAG TGCGTGTAGG CAACAAAGGC CAAGAGCGCC CAGCAGTGGT AGATAGTCAA
GGCGTGGTGC GTTGTATTGC GTCATTCACT GCAGATATAA ATGGTGATTT TCTTGCAGGC
GCCAGCTTGA ATGCGCTAAA AAAAACAGAC CTTTCGACGC TGCCAGTAAT AGACAATGTA
CAGCGCTACG CCGAGCCAGT AAAAGGCGTA GGTAAATTTA TATGTGTGGG CCTAAATTAC
GCCGATCACG CTGCGGAATC GGGGAAGGAA GTGCCCCCAG AGCCGGTTTT GTTTACCAAG
GCAACCTCGT CTATAACTGG GCCTAACGAT AATGTGGTTA TCCCTCGCAA CTCGACCAAA
ACCGATTGGG AAGTAGAGCT AGCATTTGTT ATAGGTAAAC ATGCCAAATA CGTCAGTGAA
GCCGACGCCA TGACATACGT GGCAGGCTTT ACAATCGTAA ATGACCTGTC TGAGCGGGAA
TTTCAGCTAG AGAAGGCAGG CCAGTGGTGT AAAGGCAAGG GTTGCGATAC CTTCGGCCCA
TTTGGCCCTT ATTTGGTCAC CCCCGATGAG CTAGGCGATT TCAATAACCT AGATATGTGG
TTAGATGTAA ACGGCGAGCG TATGCAGACC GGAAACTCTC GCACCATGGT ATATAAAATC
CCTTTTTTGG TGCACTACAT CAGCCAGTTT ATGAGCCTGC AGCCAGGGGA TATTATCTCT
ACAGGTACCC CACCTGGAGT GGGGATGGGG TTCCGCCCAC CTAGGTACCT GAAGGCGGGT
GATGTGATGC ATTTGGGCAT CCAAGGGCTT GGTGAGCAAA CCCAACAGGT GGTAGCAGAT
AGCTAA
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| Protein sequence | MKLVRVGNKG QERPAVVDSQ GVVRCIASFT ADINGDFLAG ASLNALKKTD LSTLPVIDNV
QRYAEPVKGV GKFICVGLNY ADHAAESGKE VPPEPVLFTK ATSSITGPND NVVIPRNSTK
TDWEVELAFV IGKHAKYVSE ADAMTYVAGF TIVNDLSERE FQLEKAGQWC KGKGCDTFGP
FGPYLVTPDE LGDFNNLDMW LDVNGERMQT GNSRTMVYKI PFLVHYISQF MSLQPGDIIS
TGTPPGVGMG FRPPRYLKAG DVMHLGIQGL GEQTQQVVAD S
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