| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2478 |
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| Symbol | |
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| ID | 3964925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3130966 |
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| End bp | 3132540 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921569 |
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| Product | cyclic nucleotide-binding domain-containing protein |
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| Protein accession | YP_527950 |
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| Protein GI | 90022123 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAG TAGTTATCAA AGCCTTTGTT GTAACCCTGT CTGGTTTAAT TATTAGTGCG
TGTGGTGGTG GCGATAGTAA GTCCCCTGAA ACCACGCCGA CACCAACGCC GACGCCAACG
CCGACACCAA CGCCGACACC AACGCCGACA CCAACGCCAA CGCCGACGCC AACGCCAACG
CCAACACCAA CACCAACACC TACACCGGTA GAGTGTACGC CAGCGTTAAG CACTATAAGC
TCTGCCTTCG ACGATGGCAG TAACGATGGC TATGTACCGG CAAATACAAT AGATGACGAC
CTAACCGATG AGTCGCGTTG GTCTTCGTTT GGCGATGGCA AGTGGATAGT GTTTGATCTT
GCTATCGCAA AAGACGTAAG AGAAATACAC AGTGCTTGGT ATAAAGGTGA TACTCGCACT
AGTTTTTACG ACATAGAAAG TTCGCTAGAT GCGGTATCTT GGAGCACCTT GCAAACTAAC
CTTCAGTCAC AAGGTACTAC AAGCCTAGAG GCGGTAACGT TAGACAGCAC CGATGCGCGT
TACATTCGCG TGGTTGGCCG CGGCAACACC GACAACACAT GGAACAGCTT GATAGAAGTA
GATATTTACG ATTGTGGTGA AACAGGTACG CCTACCGAAG ATCCTGTTGT AGTAGAGCCA
CCAGAGCCGC CAGCGCCAAC AGATGGTGAC ATGCCAGCAA CCACGCCAAA TCCGCCGCTC
GTAACTGACG CGTTAGACCC AGATGCCGCG CCATCGAGTA ACTTCGATTT ATGGCCTTGG
TATTTAAGTG TGCCAACCGA TACAGATGGC AGCGGCACTG CAGATAGTAT TAAAGAGTCC
GACCTAAACG CGGGCTACGA AAGTTCGGAA TTTTTTTACA CAGCTGCAGA TGGCGGTATG
GTATTTAAAT GCCCAGTTGC GGGCTTTAAA ACCTCTACCA ATACTTCTTA TACGCGCGTG
GAGCTAAGAG AAATGTTACG CAGAGGGAAC AGCAGTATTT CTACCCAAGG TGTAAATGGT
AACAACTGGG TGTTTGGTTC TGCACCGCAA AGCGATTTAA ACGCAGCCGG TGGAATAGAC
GGCAACCTGC GAGCCACATT GGCCGTAAAC AAGGTAACCA CCACGCACGG CGATGGCTTT
GAATACCAAG TTGGCCGCGT AATTATTGGT CAAATACACG CGAACGACGA CGAGCCAATT
CGCTTGTACT ACCGCAAATT ACCTTCTAAT AGCAAAGGCT CAATTTACTT CGCGCACGAG
TTGTTAGATG GTGACGACAC TTGGCACGAA ATGATCGGCA GCCGTGGCGA CAACGCTAGC
GACCCAGCCG ACGGTATAGC GCTAGATGAA ACGTTCAGCT ACGAAATAGA TGTACGCGGC
AACACGCTCA CTGTAACCAT TATGCGTGAA GGCAAACCCG ACGTAACCAA AGTGCTAGAC
ATGAGCGCCA GCGGCTACGA CGAAGGCGGC CAGTACATGT ACTTTAAAGC TGGCGTGTAC
AACCAAAATA ACTCGGGCGA CCCCGATGAC TACGTGCAAG CAACTTTCTA TGCATTAGAG
GCCACCCACA ACTAG
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| Protein sequence | MLKVVIKAFV VTLSGLIISA CGGGDSKSPE TTPTPTPTPT PTPTPTPTPT PTPTPTPTPT
PTPTPTPTPV ECTPALSTIS SAFDDGSNDG YVPANTIDDD LTDESRWSSF GDGKWIVFDL
AIAKDVREIH SAWYKGDTRT SFYDIESSLD AVSWSTLQTN LQSQGTTSLE AVTLDSTDAR
YIRVVGRGNT DNTWNSLIEV DIYDCGETGT PTEDPVVVEP PEPPAPTDGD MPATTPNPPL
VTDALDPDAA PSSNFDLWPW YLSVPTDTDG SGTADSIKES DLNAGYESSE FFYTAADGGM
VFKCPVAGFK TSTNTSYTRV ELREMLRRGN SSISTQGVNG NNWVFGSAPQ SDLNAAGGID
GNLRATLAVN KVTTTHGDGF EYQVGRVIIG QIHANDDEPI RLYYRKLPSN SKGSIYFAHE
LLDGDDTWHE MIGSRGDNAS DPADGIALDE TFSYEIDVRG NTLTVTIMRE GKPDVTKVLD
MSASGYDEGG QYMYFKAGVY NQNNSGDPDD YVQATFYALE ATHN
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