| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2453 |
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| Symbol | |
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| ID | 3965400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3100767 |
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| End bp | 3102533 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921544 |
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| Product | putative acyl-CoA synthase |
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| Protein accession | YP_527925 |
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| Protein GI | 90022098 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0769746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.973713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC TACCTAACGA ATTTGAAACG CTAGTTGATT TATTGCAATG GCGTGCTCAA
AAAATGCCAA ATAAAGTTGC GTTTACCTTT TTAAAAGATG GCGTAGATGA AACAGATCAA
ATTACTTTTC GTGAACTGGA TGAGCGTGCG CGCCAAATAG CGGCTCGCTT GCAACAGGAA
AATACACCAA ACCCGACTGC GTTATTACTT TATCCTCAGG GTATAGAGCA CATGTGTGCG
CTGTGGGGTT GTATGTATGC TGGCGTGCGC GCAGTACCAT TATTTGTTCC GCAAAATGAC
CGAGTATACA AGCGAGTAAA ATCTATTCAG CAGGACTCTG GAGCGCAATA TGTATTGTGC
GACAGAGAAA GTTACGACCG CTTGGAAAAG CGCTTCGACA GAATGCCAGA AGTAGCGAGT
TTGCAGTGGC TGATCTCAGA CGAATTGGAA GCAAGCTTAG CTAACGATTG GAAGCTCGTT
GCTCAAGAGC GCGATACGGT TGCTTATTAT CAATACACAT CGGGTTCAAC TGGTACTCCA
AAGGGCGTAA TGGTATCGCA CGGAAATGTT ATCTATAACG TTTCTGATAT CGACGCCAGT
TGGGATCACT CAGAAGATAC TGTGCTTGTT TCTTGGCTGC CTATCTTTCA CGATATGGGC
CTTATTTATG GCTTTATGCA GGGTGTGTAT AACGGTTTTC ACACCGTGTT ATTTAGCCCC
AATGCATTTG CGCAGCGGCC TTACACGTGG TTAAAAGCAA TAAGTGATTA TCGAGCTACG
CATTCTGGTG GGCCTAACTC AGCGTATATT ATGTGCGTAG AAAAAGTGCT TGATGAACAG
AAAAAAGATT TAGACCTAAG CTCGCTAAGA GTGATGTTTA ACGGGTCTGA ACCTGTGCGC
GAATCTACTT TGCAAAGCTT TACCCAAGCA TTTGCCGAGT GCGGTTTTAA AGCGGAGATG
CACACACCGT GTTACGGCTT GGCTGAGGCA ACATTAAAAG TTACTGCAAC AAAGCTTGGC
GAATACCCTA ACCACTTAAC GGTGGATGCA AAAGCGCTTG CGAGCAACAA AGTTTTACCC
TTGTTAGCAG GCGAAGAGGG GCAAGTATTT GTAAGTAGTG GTGTAACTGT TCAGCAGACC
GAAGTGAAAA TAGTTAACCC TGTATCTAGT GAAGTATGTG CGCCCGATAG TATTGGCGAA
ATATGGGTAA AAGGGCCAAC AAATGCGATG GGGTATTATC GCAAAGAGGA AGATACCCGC
GAAATATTTA ACGCCTATAT TAACGAAACC GTCGATGGCC CATACATGCG TACGGGCGAC
TTGGGCTTTT TCTACAATAA TGAGTTGTAC ATTGCCGGTC GATTAAAAGA TCTAATTATT
GTACGCGGTC GCAATTGTTA CCCGCAAGAT ATTGAAGAAA TTGTCGAGAA CTGTCACCCG
GCCTTATCAC CCAGTGCCGG TGCTGCATTT AGTTTGGATG TGGATGGCGA CGAAAGGCTC
ATTGTTGTTC AAAGCGTTAG GCGTTCACAC TTAAAGCATA TAGATGCGCC TGAAATTTTC
AATGCTATTC GCCGATCTGT TTCTGCTCAG TATGGTGTAA AAGTGCACGA TATTCAGTTG
CTAATGCCCG CTTCTATTCC GCGCACCACT AGCGGAAAAA TTCAGCGCAG GGCATGCAAA
CAAGCGTACC AGCAAAAAAC ATTAAAGGTG CTTGCCAGTT GGCAAGAAAC AATCGAAAGC
CCTGTGCCTA CTAGCCAAGC CACATAA
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| Protein sequence | MDKLPNEFET LVDLLQWRAQ KMPNKVAFTF LKDGVDETDQ ITFRELDERA RQIAARLQQE
NTPNPTALLL YPQGIEHMCA LWGCMYAGVR AVPLFVPQND RVYKRVKSIQ QDSGAQYVLC
DRESYDRLEK RFDRMPEVAS LQWLISDELE ASLANDWKLV AQERDTVAYY QYTSGSTGTP
KGVMVSHGNV IYNVSDIDAS WDHSEDTVLV SWLPIFHDMG LIYGFMQGVY NGFHTVLFSP
NAFAQRPYTW LKAISDYRAT HSGGPNSAYI MCVEKVLDEQ KKDLDLSSLR VMFNGSEPVR
ESTLQSFTQA FAECGFKAEM HTPCYGLAEA TLKVTATKLG EYPNHLTVDA KALASNKVLP
LLAGEEGQVF VSSGVTVQQT EVKIVNPVSS EVCAPDSIGE IWVKGPTNAM GYYRKEEDTR
EIFNAYINET VDGPYMRTGD LGFFYNNELY IAGRLKDLII VRGRNCYPQD IEEIVENCHP
ALSPSAGAAF SLDVDGDERL IVVQSVRRSH LKHIDAPEIF NAIRRSVSAQ YGVKVHDIQL
LMPASIPRTT SGKIQRRACK QAYQQKTLKV LASWQETIES PVPTSQAT
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