Gene Sde_2445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2445 
Symbol 
ID3965392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand- 
Start bp3090141 
End bp3090833 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID637921536 
Productacyl dehydratase 
Protein accessionYP_527917 
Protein GI90022090 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.743728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.288751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAT TAGAAATAAT TAAGGAAAAG AAAGAAAAAA TAGTTGAGCG GAAAGTAGAG 
CTTAACGATC TCGTATTTCC GCAATTGCGA GATTATTGGA ATGAGTTTTG GTTAAACGCT 
AAAAATAACC ATTGGCTTAA ATGGGGGATG GAGTCGGTAG TTAATCAGCC GGCTAACGAT 
ACAGAGCTAG ACCCCGAAGA TGTAATCGCT AATGTGTGTG ATAACCCAAG CGCCGAGGCC 
TTGCGCCAAA GTTTAGTTGC AAAAATTGGC GAGGTTTCAT ACGTTGGCGA ATGGCTGGTT 
GTAGACCAAA GCAAAATCGA TGGTTTTGCA GCAGTTACGG AAGATAATCA GTGGATACAT 
ACAGATGTAG AGCGAGCGCA GGCTGAATCA ACATTTAAGT CGACGATTGC TCATGGTTTG 
TTAACGCTAT CACTGCTTCC TAAGCTTACT GGCGTGGTTG ATAGCGATGC TTCCCCGTAC 
CCTGATTGTC GCATGGTTAT CAATTTAGGG TTGAACAAGG TGCGTTTTCC TGCACCGCTT 
AAAAGTGGTA ACCGCGTGCG AGCTATAAAA AAAGTCGTAA GCGTAGATGT GGTTAAGCGC 
GGTTTAATGG TTGAAGAGGA AGTTATTGTT GAGGTAGAGC ATTCAGCTAG GCCCGCCTGT 
GTGGCTAACC CCATATATCG ATTTGTATTC TAG
 
Protein sequence
MNVLEIIKEK KEKIVERKVE LNDLVFPQLR DYWNEFWLNA KNNHWLKWGM ESVVNQPAND 
TELDPEDVIA NVCDNPSAEA LRQSLVAKIG EVSYVGEWLV VDQSKIDGFA AVTEDNQWIH 
TDVERAQAES TFKSTIAHGL LTLSLLPKLT GVVDSDASPY PDCRMVINLG LNKVRFPAPL 
KSGNRVRAIK KVVSVDVVKR GLMVEEEVIV EVEHSARPAC VANPIYRFVF