| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2440 |
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| Symbol | |
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| ID | 3965387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3084937 |
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| End bp | 3086103 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921531 |
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| Product | acetylornithine aminotransferase |
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| Protein accession | YP_527912 |
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| Protein GI | 90022085 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.493949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0446911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTGT CGGCGCTAAT GAATACATAC GGTGAAAGAA AAACCACGTT AACCAAGGGT
GATGGACCTT ATCTTTGGGA TAGCGAAGGC CGCCGTTATT TAGACGCTTT ATCTGGCATC
GCTGTATGCG GGCTTGGCTA CAACTACCCA AGCGTAACCC AAGCTATTAG CGAGCAAGCC
AAAACGCTTA TTCATTGCTC CAACTTATTT CTGATAGAGC CGCAGCAGGA ACTTGGCAAA
CTATTGGTGC AAGCTTCCGG TATGGATAAA GTATTTTTTA GCAACTCTGG CGCAGAAGCT
AACGAGGCAG CTATTAAACT TGCGCGAAAG TACGCACAAG ATAAAGGCAT TACTGCACCT
CACATTATCA CCTGCGACAA AAGCTTTCAT GGTCGTACTA TGGCCACCCT ATCTGCTACG
GGCAACCCCA AAGTTAAAGC GGGCTTTTTC CCAATGGTCG AAGGGTTTAG CCATGTACCT
TACAACGATA TCGAAGCAAT CAAACAAGCG GCCACCGAAA ATACCATCGC CATAATGGTA
GAACCTATTC AAGGTGAAGG CGGTGTTAAC GTGCCGGCCG ACGATTATTT AACGAACTTA
CGCGCCTTGT GTGATGAAAA CGGCTGGCTT TTAATACTCG ATGAAATTCA AACGGGTAAC
GGCCGCACCG GCGCTTACTT CGCTTACCAG CACACAAATA TCCACCCGGA TGTAGTTACC
ACGGCCAAAG GCTTGGGTAA CGGTGTACCT ATTGGCGCTT GTTTGGCCAA AGGCAAAGCA
GCAGAGGTGT TTCAACCAGG TAACCACGGG TCTACCTTTG GCGGTAATCC ACTAGCCTGC
AGCGCTGCTG TTGCTACATT TAAAGCCTTA GTGAATGACG GCATTATGAA AAGCGGTGCC
GCTACGGGCA ACAGCATGAT CGCCAAGTTT AAAGAACGCT TTGCCAATAA CCCTAAAGTG
GTAGAGGTAA AAGGCCAAGG CATGATGATG GGTATACAAC TTAGTCAAGA CTGCCCTACT
TTAGTTGAAC GCGCGAAAGA GAAAAACCTG CTGTTAAACG TAACAGCCGG CAATACTATT
CGCCTGCTAC CGCCATTAAT TTTGACTGAA GAGCAAGCCC AAACGGTGGT GGATACTGTA
GTACAACTTG TAGAAGAAAT TGAGTAA
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| Protein sequence | MSVSALMNTY GERKTTLTKG DGPYLWDSEG RRYLDALSGI AVCGLGYNYP SVTQAISEQA
KTLIHCSNLF LIEPQQELGK LLVQASGMDK VFFSNSGAEA NEAAIKLARK YAQDKGITAP
HIITCDKSFH GRTMATLSAT GNPKVKAGFF PMVEGFSHVP YNDIEAIKQA ATENTIAIMV
EPIQGEGGVN VPADDYLTNL RALCDENGWL LILDEIQTGN GRTGAYFAYQ HTNIHPDVVT
TAKGLGNGVP IGACLAKGKA AEVFQPGNHG STFGGNPLAC SAAVATFKAL VNDGIMKSGA
ATGNSMIAKF KERFANNPKV VEVKGQGMMM GIQLSQDCPT LVERAKEKNL LLNVTAGNTI
RLLPPLILTE EQAQTVVDTV VQLVEEIE
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