Gene Sde_2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2436 
Symbol 
ID3966656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand- 
Start bp3081913 
End bp3082458 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID637921527 
Producthypothetical protein 
Protein accessionYP_527908 
Protein GI90022081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000527429 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0196691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA AAATTGTTTA CCCTATAGTT GTATCTTTCT TAATCGCATG TGCAGCAGTG 
CATGGTAGCG AAGAACAAAC ATTGAAAGAT GTAGAAACGT TTCTTGCAGA GGCGTTTGTT 
GATGCCGCAC CAGCCAGAAA GGTGCTTTGG GTAAATGATG CGCTGCGAGA AGAGGTGCGC 
CAGTATATTG GTTACGATCT TGATCAGTTG CGTGTTCGCT ATTGGGCTGC TGGTAGTCGC 
ACGGCTTGGA TACTAGAAGA GATTGGTAAA GAGCGCCCAA TTACCATGGG GGTAGTGGTA 
AATGGCGACG AAATTAGTAA TGTTTCCATT CTTGTTTACC GCGAGAGCCG CGGCGCCGAG 
GTGCAGTACG ACTTTTTTAC TAAGCAGTTT TTGAAAGCTA ACCTAGTTAA AAATACCAAA 
CGTTATGAGC TAAGTGAGTC TATAGATGGA ATCACTGGTG CTACTCTTTC GGTGCGTGCA 
GTTAAAAAAG TCGCTACACT GGCGCTTTTT CTACATCAGC AAACACCGTA CGCACTAAAT 
GGCTAA
 
Protein sequence
MFKKIVYPIV VSFLIACAAV HGSEEQTLKD VETFLAEAFV DAAPARKVLW VNDALREEVR 
QYIGYDLDQL RVRYWAAGSR TAWILEEIGK ERPITMGVVV NGDEISNVSI LVYRESRGAE 
VQYDFFTKQF LKANLVKNTK RYELSESIDG ITGATLSVRA VKKVATLALF LHQQTPYALN 
G