| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2421 |
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| Symbol | |
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| ID | 3966641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3063898 |
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| End bp | 3064509 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921512 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_527893 |
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| Protein GI | 90022066 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.287657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAATC ATGACATAGT TGAAAAGAAC ATCGGTTTAA TGGTTGTACT GGTAATTGTT
GCTATTAGTT TTGGTAGCTT GGTGGAAATT GTGCCGCAAT TCTTTTTGCC GCAAACTTCC
GAGCCAGTAG AGAACCTAAA GCCGTTGGCA GCCGTAGAAC TTGAAGGTCG CGACATATAC
ATTCGCGAAG GCTGCCACGT GTGTCACACC CAAATGGTGC GTCCATTGCG CGCTGAAGTT
GAGCGTTACG GTCATTACTC GGTAGCCGGT GAATCTGTTT ATGAGCATCC ATTTTTATGG
GGCTCTAAGC GCACAGGCCC GGATTTGGCT CGTGTAGGTC AACGCTACAG CGATACTTGG
CACAAAGCGC ATTTGTACAA CCCGCGCAAC GTAGTGCCAG AATCCAATAT GCCAGCTTTC
CCATGGTTGT TTGATGCCAA GCTAGATGGC AAATACACCG CTAAAAAGAT GGAAGCGTTA
CGCAAAGTTG GTGTGCCATA CACCGATGAA GATATAGCTG GTGCTCAGGA AGCTGTTAAA
GGCGTTACTG AAATTGATGC GCTAGTTGCG TATTTGCAAC AACTTGGTTT GCTATTCACC
CATAAGCGGT AA
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| Protein sequence | MKNHDIVEKN IGLMVVLVIV AISFGSLVEI VPQFFLPQTS EPVENLKPLA AVELEGRDIY
IREGCHVCHT QMVRPLRAEV ERYGHYSVAG ESVYEHPFLW GSKRTGPDLA RVGQRYSDTW
HKAHLYNPRN VVPESNMPAF PWLFDAKLDG KYTAKKMEAL RKVGVPYTDE DIAGAQEAVK
GVTEIDALVA YLQQLGLLFT HKR
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