| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2418 |
|---|
| Symbol | |
|---|
| ID | 3966075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3061193 |
|---|
| End bp | 3062647 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637921509 |
|---|
| Product | putative ferredoxin |
|---|
| Protein accession | YP_527890 |
|---|
| Protein GI | 90022063 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAA CACCTTCTAA TTCAGATTCG TCCGCTGAAG AAAAAGCGAA AATCAAATAT
GTTGATTTGT ACGAGGCTGA AAACAAAATC TACACCCGCA AAATAACTGG CTTTTATCAA
GCTATTCGCC GTTATACGGG GCTCCCTCTT ATTGCGGGTT ACTTGCTGTT ACCCTGGTTG
ATGATCGAAG GGCACCCAGC AGTTTTATTT GATCTCCCTG AGCGCAAGTT CCATATTTTG
TGGCTAACTT TTTGGCCGCA AGATTTTATG TTGTTGGCTT GGCTACTCAT TATTTCTGCG
TTTAGCTTGT TCACGGTAAC GGTCATGTTT GGTCGCGTGT GGTGCGGGTT TACCTGCCCG
CAAACCGTGT GGACTTTAAT GTTTATCTCA GTGGAGCATT TTTTTGAAGG CGACCGCAAC
AAGCAAATTA AGCTCGATAA GCAGGGTTGG AGCCTAGAGA AAATACTCCG CAAAGGCGGT
AAGCATACTG TTTGGGTGTT AATCGCCTTA ATAACGGGGC TTACATTTGT TGGTTATTTC
GTGCCTATCC GCGAGCTAAT TAGCGGGCTT ATTCCACACC AGAACGCAAC AACCGGTATG
CTTGTTGTTG ATGCGCACCC AGCCGCAATT TTTTGGACGA TCTTTTTTAC CGGCATGACC
TACTTAAATG CGGGTTGGTT GCGCGAGCAA GTGTGCAAAT ATATGTGCCC TTATGCGCGT
TTCCAGTCGG TTATGTACGA CAAAGATACT TTGGCGGTAC ATTACGATGC TAGTCGTGGT
GAAACACGTG GCCCGCGTAA AATGAAAGAA GATCCCAAGC AAAAAGGTTT GGGCGATTGT
ATCGATTGCT CTTGGTGTGT TCAGGTTTGC CCAGTAGATA TTGATATTCG CGACGGGTTG
CAATTTGAAT GCATTAACTG TGGGCTTTGC GTCGATGCAT GCAATGCCGT TATGGATAAA
ATGGAATACC CACGCGGCTT GATTCGCTTC GCTTCGGAGG ATGAACTAGA AAACGGTAAA
ACCAAGTTTT TCCGCCCGCG TCTATTCGGC TATGCGCTCG GCGTAGTATT AATGATCGGT
GCATTTATAG GCGCAATTAT TATTCGTACA CCACTGTCGG TGGATGTGGC ACGCGACCGC
GGGGCAAGGC TCTATCGTAT TAGCAATGAT CAAGTGCAAA ATGTGTACAC GGTCAAAATT
AATAACATGA GCCAAGAGGC GCATGAGTAC GATATTCAAG TAAGTGGCGA TTACCCGTTC
AGGTTGCACC ACTATATGGA AGTTGAACTG GAAGCTGGTG AAGTGTTTAC CATTCCATTG
CGGGTTTCTG TTGAGCGTGC GCAACTTGAT GTAGAGAAAA CAGATTTAAC GTTTAAGATT
ACCTCAAAAA CAGACCCTCT ATTAACCGCT ACAGAAGAAA GCCCATTTAT TGGGCCTGCG
GTTAAAAGTA AATAA
|
|---|
| Protein sequence | MAETPSNSDS SAEEKAKIKY VDLYEAENKI YTRKITGFYQ AIRRYTGLPL IAGYLLLPWL
MIEGHPAVLF DLPERKFHIL WLTFWPQDFM LLAWLLIISA FSLFTVTVMF GRVWCGFTCP
QTVWTLMFIS VEHFFEGDRN KQIKLDKQGW SLEKILRKGG KHTVWVLIAL ITGLTFVGYF
VPIRELISGL IPHQNATTGM LVVDAHPAAI FWTIFFTGMT YLNAGWLREQ VCKYMCPYAR
FQSVMYDKDT LAVHYDASRG ETRGPRKMKE DPKQKGLGDC IDCSWCVQVC PVDIDIRDGL
QFECINCGLC VDACNAVMDK MEYPRGLIRF ASEDELENGK TKFFRPRLFG YALGVVLMIG
AFIGAIIIRT PLSVDVARDR GARLYRISND QVQNVYTVKI NNMSQEAHEY DIQVSGDYPF
RLHHYMEVEL EAGEVFTIPL RVSVERAQLD VEKTDLTFKI TSKTDPLLTA TEESPFIGPA
VKSK
|
|---|
| |