Gene Sde_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2414 
Symbol 
ID3966071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3057011 
End bp3057850 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content47% 
IMG OID637921505 
Producthypothetical protein 
Protein accessionYP_527886 
Protein GI90022059 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTGGG AAACATTAGT CGCAGCATTC TTTTTAGGTT TACTTGGTGC TGGCCATTGT 
TTAGGTATGT GCGGTGGTAT AGCTGCAGCG CTTTCTTTTG CATTACCCGC TAATAAAACC
CCTCAAAAAT TAGTATTTTT AACCGCTTAT AACGCTGGTC GCATTGCTAG CTATACCTTT
ATAGGCTTGA TGGCTGGGCT TGTAGGTTGG TGGTTAGGGC AAGTTACGGG GGCGGTTTAC
CTGCGTATAT TTGCCGGTGT GCTGCTTATT TTGCTGGGCT TATACCTAGC TGATTGGTGG
CGGTTACTGG GGCTATTGGA GAAAAGTGGT GCGGGCTTGT GGGCAAAAAT ACAACCCATT
GGCAATCGGC TGCTACCGGT TAAAACAGTA CCGCAGGCGG CGCTATTAGG TTTGATTTGG
GGCTGGTTGC CGTGCGGCTT AATATACTCC GCACTTGGTT TCGCGCTGGC TTCGTCAAAC
TCAAATGCGC TTTATGGTGC GAGTATTATG CTGGCCTTTG GCTTAGGCAC GTTGCCTGCC
GTGTTTACTG GTGGGCTTGC TGCAGAAAAG ATTTTAGCAT TGTTTAAATT GCGCAACGTA
CGCATAGGGT TCGCGTTGTG TTATATCGTT TTTGGCGTTT GGACTGTGTA TATAGCCATA
CAGCATGCAG GCCACTCGCA TCACACAACG GGCGAGCATG CAGAGCATAA TCATGTGCAT
GCAGAAAAAA CGGATAGCCA ATATGCCCCA GAGGAAGGGC AATTAAATAA TGACGATAAC
ACCCATAATA ATTCTCAGGA AAATCCTCAG CACCCACCGC ACCATTCACA TCACCATTAA
 
Protein sequence
MIWETLVAAF FLGLLGAGHC LGMCGGIAAA LSFALPANKT PQKLVFLTAY NAGRIASYTF 
IGLMAGLVGW WLGQVTGAVY LRIFAGVLLI LLGLYLADWW RLLGLLEKSG AGLWAKIQPI
GNRLLPVKTV PQAALLGLIW GWLPCGLIYS ALGFALASSN SNALYGASIM LAFGLGTLPA
VFTGGLAAEK ILALFKLRNV RIGFALCYIV FGVWTVYIAI QHAGHSHHTT GEHAEHNHVH
AEKTDSQYAP EEGQLNNDDN THNNSQENPQ HPPHHSHHH