| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2409 |
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| Symbol | |
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| ID | 3966066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3051519 |
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| End bp | 3052376 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921500 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_527881 |
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| Protein GI | 90022054 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACC ACATTCATCA CACTATTAAT AGCAATATCA ATAACAACAT GCTTAACAAT
AGCTCAGTTA CAGCGCCGGC CAAGGGCCTT ATTCAGCCCG CGCTTAGCAC CCAGCATTTT
CAACTGTATC ACCACCCACC AAGCCCCGCA TTAACCCAGT GGATTGCTTA TTTTTGGGAA
GTTCGCTGGG ATTTAGCCAA TCAGCCCGCA TACACCCAGC AAAACCTACC TCACCCTGCG
CAACATTTAA TTGTGAATCC ATTTCTTAAT AGCGGCATTA TGGGGGTTCA TACACGCCGG
TTTGAGTATA AGTTACATGG CAAGGGGCAG GTGTTGGGTT GTCGATTTAA TTTCGGCGCG
CTCGCACATT TATTGAGTGT AAAGCCCAAG CTGTTGAACG ATGTGTATTC GCCCGTTGAG
CGTATTTTGC CGCTTACCCA ATCTGCCTTA GATGAACGAG TACGTGAAGA TAATTTGAGT
CAGGCCATTC AAGATATAGA GCAAGCGGTG TTGGCCGTGG CGCAGCCATT AAGCAGTGAT
GCGTTACTGG CGGGCAAATT AGTGGAGGCG ATTGAAGCCA ATCGAGCCAT TGTGCAAGTG
GAGCAGCTGG CTGAGCAGTT TTCTATTTCT GTTAGAAAAT TACAGCGGTT ATTTGCCGAC
TATATAGGGG TTAGCGCTAA GTGGACGATT TGTCGGTATC GCTTGTTTGA AGTGCTGGCA
GAGCTAGATA AACAACCGCA GGAGCAGCTT GTTCACTTGG CCAATCGCAT GGGCTATTAC
GATCAGGCAC ATTTTAATCG CGTGTTTAAA ACCATGGTTG GTGTTACTCC TAGTGAATAC
GCAAGTGGCA TTACTTAG
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| Protein sequence | MPNHIHHTIN SNINNNMLNN SSVTAPAKGL IQPALSTQHF QLYHHPPSPA LTQWIAYFWE
VRWDLANQPA YTQQNLPHPA QHLIVNPFLN SGIMGVHTRR FEYKLHGKGQ VLGCRFNFGA
LAHLLSVKPK LLNDVYSPVE RILPLTQSAL DERVREDNLS QAIQDIEQAV LAVAQPLSSD
ALLAGKLVEA IEANRAIVQV EQLAEQFSIS VRKLQRLFAD YIGVSAKWTI CRYRLFEVLA
ELDKQPQEQL VHLANRMGYY DQAHFNRVFK TMVGVTPSEY ASGIT
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