| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2407 |
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| Symbol | |
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| ID | 3966064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3050122 |
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| End bp | 3050661 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637921498 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_527879 |
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| Protein GI | 90022052 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.779185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAATCT CCGATCAAAC CCTCATTGCC CGAGTGCAAG CCAATGGCGA CCAGCATGCT
TTCTCGCAAC TTGTGAGAAA GCATCAGTCG CAGGTGCGCA GTTGGGCGCG GAGATTGTGT
AACGGCGACG AACACTTAGC CGACGACCTT GCTCAAGAGG CGTTTATCAA AGCCTATATG
GCACTTGCCG CATTTCGCGG TGATGCTAAA TTTTCTGTGT GGCTGTATCG CATTGTGTTT
AATGTGGCTG CGTCTAAATG GCGAAAGAAA AAACTAGATT GGTGCAATAT AGATGAGCAA
CCCGACATCG CCGCCGAGGC GTGCGAGTTG CATCAATTTG CTGCTAGCGA AGATATAACG
CGCGCAATGC AGGTATTAAC TGAGCCGCAG CGCATAGCCG TGCAGCTGTG TTTTGAAGAG
GGCTTTTCCC ACGACGAAGC CGCGCAAGTT ATGGGCGTAC CTTTGGGGAC CTTAAAGACC
CATGTTAATC GGGCTAAAGC TAAGCTTAAA GTATCGTTGG CGAGTTGGGA GCAGGGATAG
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| Protein sequence | MTISDQTLIA RVQANGDQHA FSQLVRKHQS QVRSWARRLC NGDEHLADDL AQEAFIKAYM
ALAAFRGDAK FSVWLYRIVF NVAASKWRKK KLDWCNIDEQ PDIAAEACEL HQFAASEDIT
RAMQVLTEPQ RIAVQLCFEE GFSHDEAAQV MGVPLGTLKT HVNRAKAKLK VSLASWEQG
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