Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2405 |
Symbol | |
ID | 3966062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3048853 |
End bp | 3049563 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921496 |
Product | electron transport complex RsxE subunit |
Protein accession | YP_527877 |
Protein GI | 90022050 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.561649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTT ACAGCGAAAT CACCTCTAAC GGCTTGTGGA AAAACAACCC CGCGCTGGTA CAACTTTTGG GTTTATGCCC ACTTCTAGCG GTAACTGGCT CGGTAGTAAA TGCTCTTGGT TTAGGCTTGG CAACCCTGCT TGTACTCATT GGGTCTAACG TTGCGGTTTC GTTAATTCGC AATGCAGTTA GCGATGCTGT GCGCTTACCG GCCTTTGTGA TGATTATTGC TGCCTTTACC ACCTGCACCG AATTAGTGAT GCAGGCATTT ACTTTCGAGC TTTATCAAAT ACTAGGTATT TTTATTCCGC TTATTGTTAC CAACTGCTCT ATTCTCGGCC GCGCCGATGC CTTTGCCAGT AAAAACAAAG TACTGCCTTC AGCAGTAGAC GGTTTTATGA TGGGTATGGG CTTTTTACTA GTGTTACTGG TAATTGGCGC AGTACGCGAA ATTATTGGCA ACGGCACACT TTTCGAAAAC ATGCATTTGT TGTTTGGTGA AGCGGCGCGC AACTGGCGAC TGGATTTATT TGGTGAAGGC TATAAAGGCT TTTTGGTGGC GGTATTACCA CCCGGCGCAT TCTTAGTTAC AGGCCTATTA ATTGCCGTTA AAAATATGGT GGATGCAGAA TTAAAACGCC GCGAAGATGC GCGTAAAGCC AAACCGGTAA AAGGCTCTAA ACGCGTGCGT ACTACAGGCC AAATCGCTTA A
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Protein sequence | MATYSEITSN GLWKNNPALV QLLGLCPLLA VTGSVVNALG LGLATLLVLI GSNVAVSLIR NAVSDAVRLP AFVMIIAAFT TCTELVMQAF TFELYQILGI FIPLIVTNCS ILGRADAFAS KNKVLPSAVD GFMMGMGFLL VLLVIGAVRE IIGNGTLFEN MHLLFGEAAR NWRLDLFGEG YKGFLVAVLP PGAFLVTGLL IAVKNMVDAE LKRREDARKA KPVKGSKRVR TTGQIA
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