| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2404 |
|---|
| Symbol | |
|---|
| ID | 3966061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 3048189 |
|---|
| End bp | 3048836 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637921495 |
|---|
| Product | electron transport complex protein RnfG |
|---|
| Protein accession | YP_527876 |
|---|
| Protein GI | 90022049 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG |
|---|
| TIGRFAM ID | [TIGR01947] electron transport complex, RnfABCDGE type, G subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.59015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTAGGAA AGTCTATAAC TAAAAACAGT GTGATTTTAG GCGGGTTCGC CTTGGTTACC
GCAGCGATTT TGGCCTTTAC CTTCCAAGCA ACTGCAGAAA AAATTGCAGA GCAAGAGAAG
CGAGCAGCAG AAAAAGCCCT ACTACAAATA GTGCCGCGCG AGCGTCACGA TAACGATATG
CTGTCAGATA CATTAACCTT CTCGGCTGAG CAATCTGCTG TATTAGGTGT AAAAGGCCCT
GTGGATGTCC ACCTTGCTAA ACTCGATGGC GAATTGGTTG CTGCAATCAT TCCAGCGATC
GCGCCAGATG GTTACAGTGG AGAAATTAAA CTTATTGTTG GTGTAAATGC CGATGGGTCG
GTTGCCGGTG TACGCGTACT CGCCCACAAA GAAACCCCTG GGCTAGGCGA CAAAGTAGAC
CTAAACAAAA GCGACTGGGT ATTAAGCTTT ACCGGTAAAT CACTACTTAA CCCAACAGCC
AACAAGTGGA AAGTAAAGAA AGATGGCGGT GAATTTGATC AATTTACCGG CGCAACCATT
ACACCGCGCG CAGTAGTAAA ACGCGTTCAA CACGTTTTGG AATTTTTCGA AGCCAACAAA
GCTGCTCTCA CCCAAAACAC ACCCGCTGCA CCTGCAGCTA TAAACTAA
|
|---|
| Protein sequence | MLGKSITKNS VILGGFALVT AAILAFTFQA TAEKIAEQEK RAAEKALLQI VPRERHDNDM
LSDTLTFSAE QSAVLGVKGP VDVHLAKLDG ELVAAIIPAI APDGYSGEIK LIVGVNADGS
VAGVRVLAHK ETPGLGDKVD LNKSDWVLSF TGKSLLNPTA NKWKVKKDGG EFDQFTGATI
TPRAVVKRVQ HVLEFFEANK AALTQNTPAA PAAIN
|
|---|
| |