| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2401 |
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| Symbol | |
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| ID | 3966058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3043828 |
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| End bp | 3046065 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921492 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_527873 |
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| Protein GI | 90022046 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA TTTGGGACAT TCACGGCGGT ATTCACCCCG AAGAAAACAA ACACCAGTCC
ACTGGTACAG CCATTGGCTC TATTCCGCTA CCGCCAGAAA TAATTCTGCC GTTAAACCAA
CATATTGGTG CGCCGGCAGA AGCTTGCGTA AGTGTTGGCG ACAAAGTACT TAAAGGGCAA
TTAGTGGCAA AAGCGCAAGG CCTATTTAGC GCCGGTATTC ACGCCTCTAC ATCTGGTGAA
GTCATTGCCA TTGAAGACCG CGTAGTAACC CACCCTTCGG GCATGAGCGC GCAGTGCATA
ATTATTAAAC CCGACGGCGA AGACCGCTGG ACCCAACTTG ATGCCTGTGA AGACTACGCC
CAACTCGATC ACGACCGTCT CGTACAAAAA ATACGCGCAG CGGGTATTGT AGGTATGGGG
GGCGCCGGCT TTCCAACGGC TATCAAAGTA AACCCTAAAT CGAATAAGCA CGTTAAAACA
CTTATATTTA ACGGCACAGA ATGTGAACCC TATATAACCG CCGACGACAT GCTAATGCGC
GAGCGCGCAG ACGATATAGT AAAAGGCGTG CAACTTATTG CTCGCTTTAT GGGAGAAGTA
GAAGAAACCC TTATCGGCAT AGAAGACAAT AAACCTGAAG CCATTGCAGC AATGCAAAAA
GCCGCTGAAG GTACAGATAT AGAAGTGGTT GTATTCCCCA CTAAATATCC ATCGGGCGGC
GAAAAACAAC TCATTCAAAT ACTTACTGGT AAAGAAGTGC CCTCTGGCGG CTTACCCGCA
GATATTGGTA TTGTGGTGCA AAACGTTGGT ACAGCCTTAG CTGCGTATCG CGCTGTGCGT
TTTGGCGAGC CATTAATTAG CCGTGTAACC ACGGTGGTGG GTGAAACCCT CACAACCCAA
CGCAACATCG ACGTGCTAAT AGGCACCCCA CTCTCTTTTG TACTAGAGCA GCACGGGTTT
AAAGCAGAAA AGAAACAGCG CCTTATTATT GGTGGCCCAA TGATGGGGTT TGCGGCTAAC
GATTTTGATG TGCCGGTAGT AAAAACCACT AACTGTATTC TTGCCCCAAC ACAAAAAGAG
CTCCCCCTGG CGCCACCGGC GCAAGCGTGT ATTCGCTGCG GTATGTGTGC AGAGGCCTGC
CCCGCAAGTT TGCTTCCGCA ACAGTTATTT TGGTATTCGC AAGCGGAAGA TCACGACCGC
TTAAAAGCGC ACAACTTATT TGACTGCATT GAGTGCGGCG CATGCTCTTA TGTATGCCCT
TCTAATATTC CACTTGTACA ATATTACCGT GCCTCTAAGG GCGCTATAAA AATTGCCAAT
GCCGAAAGAG AAAAATCCGA TAAGGCGCGC GTGCGCTTCG AATTCCGCCA AGAGCGTATA
GCCAAAGCAG AAGCCGAAAA AGAAGCCAAA CGCTTAGCAC GTAAAAAAGC CGCCGAAGAA
GCCAAAAAAC TACTGGCAGA AAAAGCAGAT TCCCCCGCAG CAGCGAATGA AAAAACAACA
AGCAAACCTG GTGCCGCTGC AGCTAAGCCA CAAGCGGCAG ACCCTGCAAC ACAAAAGGCA
AAATTAGAGC GAGCGCTCTC GAGCGCGCAA AGCCGCGTAG AACGAGCACA AAAAGCACTG
AATGATGAGC AGGAAGAAGC AGATGAAGCG CGCTTAGATT CACTAAGAGC ACGCTTAAAA
CAAGCAGAAC TAAAAGCATC TGAAGCGCAA GCTAAGCTTG ATGAATTTGG CAAAGCCCCC
GAAGTCACTG TGGGTGGCGA ACAAGCCATT AAAGATAAAA TGGCCATGTC GCCCCGCGAC
AAATTAGAAA AGAATTTAGC ATCCTTAAAC AAACGTCTAA GTACGGCGCA AGAGCGACTA
GCCGAAGCAC AAGCAAATGG CGCAGCCACG GTTGATGCAC TGAAAATGGG CGTAGAGAAA
CTGCAGCAAA AAGTTAACGA CGCCGAGCAA GAACTTGCCC AACTAGGCCC AGACTCAGCC
GCACAAGGTG CAGCCGAAAC GGCACCTGCC CTAAGCGCTG CAGAGCAAGC AATAGAAAAA
GCCAAAGCAA AAGCGGCCGC GCAGGCTAGT ATGAGCGAAG AAGAAAAAGC GGCGGCTAAA
CTGGAAGCCC TTAAAGCGCG CTTAGAAAAA GCCCGCGCAC GCCTTACAAA GGCCGAAGAA
GAGCAAGACG AGAATATCGA CGCCTTCCGC GCTGGGGTAG AGAAACTGGA ACAAAAATTG
ACAGAACTTT CAAACTAG
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| Protein sequence | MRKIWDIHGG IHPEENKHQS TGTAIGSIPL PPEIILPLNQ HIGAPAEACV SVGDKVLKGQ
LVAKAQGLFS AGIHASTSGE VIAIEDRVVT HPSGMSAQCI IIKPDGEDRW TQLDACEDYA
QLDHDRLVQK IRAAGIVGMG GAGFPTAIKV NPKSNKHVKT LIFNGTECEP YITADDMLMR
ERADDIVKGV QLIARFMGEV EETLIGIEDN KPEAIAAMQK AAEGTDIEVV VFPTKYPSGG
EKQLIQILTG KEVPSGGLPA DIGIVVQNVG TALAAYRAVR FGEPLISRVT TVVGETLTTQ
RNIDVLIGTP LSFVLEQHGF KAEKKQRLII GGPMMGFAAN DFDVPVVKTT NCILAPTQKE
LPLAPPAQAC IRCGMCAEAC PASLLPQQLF WYSQAEDHDR LKAHNLFDCI ECGACSYVCP
SNIPLVQYYR ASKGAIKIAN AEREKSDKAR VRFEFRQERI AKAEAEKEAK RLARKKAAEE
AKKLLAEKAD SPAAANEKTT SKPGAAAAKP QAADPATQKA KLERALSSAQ SRVERAQKAL
NDEQEEADEA RLDSLRARLK QAELKASEAQ AKLDEFGKAP EVTVGGEQAI KDKMAMSPRD
KLEKNLASLN KRLSTAQERL AEAQANGAAT VDALKMGVEK LQQKVNDAEQ ELAQLGPDSA
AQGAAETAPA LSAAEQAIEK AKAKAAAQAS MSEEEKAAAK LEALKARLEK ARARLTKAEE
EQDENIDAFR AGVEKLEQKL TELSN
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