| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2398 |
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| Symbol | metG |
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| ID | 3967918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3040511 |
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| End bp | 3042544 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921489 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_527870 |
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| Protein GI | 90022043 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.323766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.502216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATA AGCGCCAGAT CCTCGTAACC AGCGCCCTCC CATATGCTAA TGGTGCCATC
CACCTTGGCC ATATGGTAGA AACCATCCAA ACCGATATTT GGGTGCGTTT CCAAAAAATG
CAGGGCCACG ACTGTACCTA CGTTTGTGCC GATGATGCAC ACGGTACTGC GATCATGTTA
CGTGCAGAGC AACTTGGCGT TACCGCAGAA GAACAAATTG CCAAAGTGAA AGCCGACCAC
GAAGCGGATT TTAAAGATTT TCTAATCGGC TTTGACAACT ACCACTCTAC CCATTCAGAA
GAGAACAAAG CGCTTTCGCA TTTAATTTAC GAGCGTGTAA AAGCCAACGG CCACATAGCC
GAGCGCTCCA TTACGCAAGC GTTTGACCCA GAGAAAAACC TGTTCTTAGC AGACCGCTAC
ATTAAGGGCA CCTGCCCCAA GTGCGGTGCA GAAGACCAAT ACGGTGATAA CTGCGAAAAC
TGCAGTGCCA CCTACAGCCC TATGGAGCTG AAAAACCCAC GCTCTGTAAT CTCTGGCGCG
ACACCCGTAG CCAAAGAATC CGTTCACTAC TTCTTCACGT TGCCAGAGTT CACGGGCTAT
CTAAAAGAGT GGACACGTGC CGGCCACCTG CAAGACGAAG TTGCCAACAA GCTTGCGGAA
TGGCTAGATG CCGGCCTACA AGAGTGGGAT ATATCACGAG ACGCACCCTA CTTTGGCTTT
GAGATACCAG GCGCGCCTGG CAAATACTTC TATGTATGGC TAGACGCTCC TATTGGCTAC
ATGGCCAGCT TTAAGCAACT GTGTGATCGC ACCGGTAAAG ATTTCGATGA GTACTGGAAA
GCCGACTCCA ACTGCGAGCT TTATCATTTT ATCGGCAAAG ATATTGTTAA CTTCCATGCG
CTATTCTGGC CAGCCCTACT TAGCGACGCA GGCTTTCGCA CACCGACAAA AGTATGTGTG
CATGGCTTTT TAACCGTAGA CGGCAAAAAA ATGTCTAAGT CGCGCGGCAC ATTTATTAAT
GCCCGCACTT ACTTAGATCA CTTGCAGCCA GAATATCTGC GCTACTACTA CGCCGCCAAA
CTAACTGGTA GCGTGGACGA TATAGATTTA AACCTAGAAG ACTTTGTACA ACGGGTTAAC
TCCGACCTTG TAGGTAAAGT AGTAAATATT GCCAGCCGCA CCGCTAAGTT TGTGCAAAAA
GCAGGCGGCG CGCTTTCTGC AAACATTATT AATGAAGAGC TGTGGCAATC TTTCGTCAAA
GCTGGCGATG TAATTGCGGC CCATTACGAG AACCGCGATT ACAGCAAAGC CATGCGCGAA
ATTATGGCGC TGGCTGATTT AGCCAACGAG TTTATTGCAG AGCAAGCGCC GTGGGCCTTA
GCCAAGCAAG AAGGCAACGA GCAAAAGGTA TTGGACGTGT GCAGTTTAGG TATAAACTGC
TTCCGCGCCA TTATGACTTA CCTAAAACCT GTACTACCTC AAACCGCTGT TGCCGCAGAA
GAATTTTTGG GCACCGAATT AACCTGGACT GGCCCACTTA GCTTTTTGGG CGAGCACACC
ATAAACAAGT TCAAGCCATT AATGACCCGC ATTGAAGGCG AAAAAATAGA AGCCATGATT
AACGACTCGA AAGAAGCGAC CGCCGCTATG GCAAAAACTA TTGCCGAACC AGCAGCCGAT
AGCCCACTCG CTAAAGAACC TATTGCAGAT GAAATAGAAT TTGCCGATTT CGCTAAAGTG
GATCTACGCG TTGCATTAAT CGCCAATGCA GAACATGTTG AAGGTGCAGA CAAACTACTG
CGCTTGACAC TCGACCTAGG TGGCGAAACC CGCAACGTAT TTGCCGGTAT AAAAAGCGCA
TACCTACCTG AAGATTTAAT TGGCAAGCAC ACCATTATGG TTGCCAACCT AAAGCCGCGA
AAAATGAAAT TTGGCATGTC TGAAGGCATG GTATTAGCAG CGGGCCCTGG CGGCAAAGAG
CTATATATAC TCGAGCCACA CGAAGGCGCC CTACCCGGCA TGCGTGTAAT GTAA
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| Protein sequence | MTNKRQILVT SALPYANGAI HLGHMVETIQ TDIWVRFQKM QGHDCTYVCA DDAHGTAIML
RAEQLGVTAE EQIAKVKADH EADFKDFLIG FDNYHSTHSE ENKALSHLIY ERVKANGHIA
ERSITQAFDP EKNLFLADRY IKGTCPKCGA EDQYGDNCEN CSATYSPMEL KNPRSVISGA
TPVAKESVHY FFTLPEFTGY LKEWTRAGHL QDEVANKLAE WLDAGLQEWD ISRDAPYFGF
EIPGAPGKYF YVWLDAPIGY MASFKQLCDR TGKDFDEYWK ADSNCELYHF IGKDIVNFHA
LFWPALLSDA GFRTPTKVCV HGFLTVDGKK MSKSRGTFIN ARTYLDHLQP EYLRYYYAAK
LTGSVDDIDL NLEDFVQRVN SDLVGKVVNI ASRTAKFVQK AGGALSANII NEELWQSFVK
AGDVIAAHYE NRDYSKAMRE IMALADLANE FIAEQAPWAL AKQEGNEQKV LDVCSLGINC
FRAIMTYLKP VLPQTAVAAE EFLGTELTWT GPLSFLGEHT INKFKPLMTR IEGEKIEAMI
NDSKEATAAM AKTIAEPAAD SPLAKEPIAD EIEFADFAKV DLRVALIANA EHVEGADKLL
RLTLDLGGET RNVFAGIKSA YLPEDLIGKH TIMVANLKPR KMKFGMSEGM VLAAGPGGKE
LYILEPHEGA LPGMRVM
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