Gene Sde_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2397 
Symbol 
ID3967917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3039075 
End bp3040157 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content49% 
IMG OID637921488 
ProductATP-binding Mrp/Nbp35 family protein 
Protein accessionYP_527869 
Protein GI90022042 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.183831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG CATTGCGCCA GCAGGTATCT GCTTTACTTG AATCAATTTC TATTCCCCAT 
GTGGCCGGTT TTAGCTGTGC CGATGTAGCA GAAATGGCCG TGGAGGGCGA CAAAGTTTTG
GTTCGCATTA GCCTTGGGTT TCCGTGTGAG GGAATTAAGC AGGCGTTGGC GAGCAACGTT
GAAAGCACAT TAGCCAGCAA TGGTATACAG GTAGGCGGCG TTGAGGTAGT GCAAGATATT
CCAGCTATCG TGCCTAAGAA TACAAGCAGT AGCATTGGTG GCGTTAAAAA TATTATTGCT
ATTGGCTCGG GTAAAGGTGG CGTGGGTAAA TCCACAACTT CTGTGAATAT CGCGTTGGCT
TTAGCGCATA TGGGGGCCAA AGTGGGGCTG CTCGACGCGG ATATTTACGG CCCTAGCCAA
CACCAAATGC TAGGTGTAGC GGGTAAGCGC CCAGAAATGT ATGGCCCCAA TATGATTGAG
CCTATTAAAG CCCACGGCTT AAGCTTAATT TCTATGGGTA ACTTGGTAAC CGAAGATACC
CCCATGATTT GGCGCGGCCC CATGGTGAGT GGTGCTTTAC AGCAGTTGCT GCAAAATACA
CACTGGGTAG ATGTCGATTA TTTGATCATT GATATGCCGC CCGGCACAGG TGATATTCAG
CTTACGCTTT CGCAGGCTGT ACCGGTATCT GGTTCGGTTA TTGTTACCAC GCCGCAGGAT
ATTGCCTTGC TAGATGCTGT TAAAGGCATA GAAATGTTCC GCAAGGTGAA TATTCCTGTA
TTGGGCGTAG TTGAGAATAT GTCGGTTCAC ACCTGCAGCA ATTGCGGCCA CCAAGAAGCA
ATATTTGGCG AAGAGGGCGG TAATAAGCTC GCTAAGCAAT ACGATGTGAA TGTACTTGGT
CGCTTGCCTT TACAGCTGGA TATTCGCGAG CAGACCGACC AAGGCAAGCC GCCGGTGGCA
ACCAACCCCG AATCTGATGT GAGCTTGATA TACCGTGAGA TTGCAACCCA AATGACGGTA
AATCTATGGC GCCAAGGCTT GGCGGCCCCC GCTGCACCAG AAATTAGCTT TTCTGACGAT
TAA
 
Protein sequence
MSDALRQQVS ALLESISIPH VAGFSCADVA EMAVEGDKVL VRISLGFPCE GIKQALASNV 
ESTLASNGIQ VGGVEVVQDI PAIVPKNTSS SIGGVKNIIA IGSGKGGVGK STTSVNIALA
LAHMGAKVGL LDADIYGPSQ HQMLGVAGKR PEMYGPNMIE PIKAHGLSLI SMGNLVTEDT
PMIWRGPMVS GALQQLLQNT HWVDVDYLII DMPPGTGDIQ LTLSQAVPVS GSVIVTTPQD
IALLDAVKGI EMFRKVNIPV LGVVENMSVH TCSNCGHQEA IFGEEGGNKL AKQYDVNVLG
RLPLQLDIRE QTDQGKPPVA TNPESDVSLI YREIATQMTV NLWRQGLAAP AAPEISFSDD