| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2396 |
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| Symbol | dcd |
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| ID | 3967916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3038418 |
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| End bp | 3038987 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921487 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_527868 |
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| Protein GI | 90022041 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.181474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATTA AATCCGATAA GTGGATTCGC CGTATGGCAG AAAACGAAGG GATGATCGAT
CCTTTTGAGC CGGGCCAGGT TCGTTATAAC GCTGATGAGC AGCGTTTGAT TTCGTATGGT
ACCTCTAGCT ATGGCTATGA TGTGCGCTGT GCGGATGAGT TTAAGATATT TACCAATGTG
CACTCTGCTA TTGTAGATCC GAAAAACTTT TCGGATGACA GCTTTGTAGA TGTGAAGAGC
GATGTGTGTA TTATCCCTCC CAATTCATTT GCATTGGCGC GAACAGTAGA ATATTTCCGT
ATTCCACGAA GCGTGCTTAC TGTGTGTTTG GGTAAGTCTA CCTATGCGCG CTGCGGTATT
ATTGTAAACG TAACGCCGCT AGAGCCAGAG TGGGAAGGTC ACGTAACACT TGAGTTTTCT
AACACTACAC CTCTGCCTGC AAAAATTTAT GCGAATGAAG GTGTTGCTCA AATGTTGTTT
TTTGAGAGTG ATGAAGTGTG TGAAACATCC TACGGTGATC GCGGTGGCAA ATATCAAGGT
CAGCGCGGGG TGACATTGCC ACGCACCTAG
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| Protein sequence | MSIKSDKWIR RMAENEGMID PFEPGQVRYN ADEQRLISYG TSSYGYDVRC ADEFKIFTNV
HSAIVDPKNF SDDSFVDVKS DVCIIPPNSF ALARTVEYFR IPRSVLTVCL GKSTYARCGI
IVNVTPLEPE WEGHVTLEFS NTTPLPAKIY ANEGVAQMLF FESDEVCETS YGDRGGKYQG
QRGVTLPRT
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