| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2390 |
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| Symbol | |
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| ID | 3967910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3029518 |
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| End bp | 3032847 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921481 |
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| Product | argininosuccinate synthase |
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| Protein accession | YP_527862 |
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| Protein GI | 90022035 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0671572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000572722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGCACC CCAACTGGCG GAAAAATAAT GTTCGGTCGT CTATACAACA AGCCTGTATA
CCGCAGGCTG CTGAGAGAAA CGGACGGACA ATAATTACTG CAGTAACCTT GGGTGCTCTC
ATTTCTTTTT CTGCTTTGGC GCAAGCCGAA ACAGACACCC TAGAAAAAGT CGTACGTTTC
GATATTCCTC AGCAACGAGC AGACATATCG CTTACTGAAT TTGCTAAGCA AGCTAACATT
ACTCTCATCT TTCCATTCGA TGACGTAAAA CAATTGCAAA CAAATTCTTT ACAAGGCGAA
TACTCCATAA CTGATGCTGT AGCACTTTTA CTGAGAGATA CTCAGCTATT TGTGAATATT
GGTGCGGATG GTCAGCTCAC CATTCTTATG GAACATGACC TAGGGGAAAT CGACTCCATG
CATAAAAAGA AATTGTTATC TAGCGCGGTT ATCGCCGCAT TATCTTCACT CACCGGTGCA
AATGCTATTG CACAACAAAC CTCCGCACCC GCTGGCCAAG TTGAGGAAGT TTTGGTTACA
GGTATTCGCG CAAGCTTACA GCGCGCGATG GATGTAAAAC GCGAAAGCGG CGGCGTAGTT
GATGCTATTT CATCAGAAGA CATTGGTAAA TTCCCAGACA CCAACCTTGC AGAATCGCTG
CAACGTATTA CGGGTGTATC CATTGACCGC TCAGGCGGTG AAGGTCAACA AATTACTGTT
CGCGGTTTTG GTCCACAATT TAATACTGTA CTTGTTAATG GTCGCCAAAT AGCCTCAGAA
GATACATCGC GCGCCTTTAA CTTTGACACG GTTGCTTCAG AATTAGTTAA ACGTTTAGAT
GTTTATAAAA CATCCTCGGC TACTCTCCAG TCTGGCGGTA TTGGCTCAAC GGTTAACATT
ACAACTGCGC GCCCATTAGA TATTGGCGAG TTTAAAGTTG CTGGTAGTGC CAAAGCACTT
ATGGATGGCA ACAGCGAAGA AACCTCACCA CAAATATCTG GCATGATTAG CAACACCTTT
GCCGACGATA CTTTTGGTGT GCTATTTGCG CTTTCACATC AAGAGCGCAG CACCCGCTTA
AACCAAGCGC AAATGGATGG CTGGTTAGAA AACGTTGGCG TGCCCAACCC CATGACAGAA
AGCGGTGCCG ACTGGGATGG CAACGTATTC TCGCCACGTA ACTACGACCA TAAAGTCACG
TTTGAAGATC GCAAACGCAC TAATGCAAAT TTAGTATTGC AATACGCGCC CTCCGACGAT
TTAACTATTA CCGGTGATTT GCTTTATACC GATTTCGACA TAAACACAGA TACCACATCG
TACGGCCACT GGTTTACCGC GCCAAACATT CAAGGCGTAG GTGACGACGG CTCATTGTTC
GATACCGACG GCGAGCGCCG CCGCCCAATC GTTGACGAGA ACGGCACGCT TATCGATTTA
TACCAAGAAG TAGGTTTAGC AACCGACATG CACGCTAAAA CCTTCGACCG CTTAACCGAA
ACAACCGCTA TTGGTTTAAA CGCAGAATGG CAAGCTAACG ATAACCTACA GTTAGTGTTC
GATCTTTCGC ACTCTACTTC TGAGCGCGAA GCGAACAATG GTGGCGGCGA CCAACTCTCA
CTTATTGGCT ACGCCAACCG AGTACGCTTT CAGGTAGATA ACAATATACT GCCGCTGGCC
TCTATGTTTG CCGAAGCAAA CCCCAATATT TATAGCGGCC AACAGGAAAT AGACGGCGCA
ATTATTGATG ATAGCGATGG ATTTGCCGGT TACGACCCAG CCATTACCCC TGCTGGCGTT
AACGACCACC TAAACAAAGA CAATAGCCGA GCTCACGTTA TGTTGCGCCG AGGTTGGGCG
GTGGAAGATG CCGTTACCCA ATTTCGCATG GACGGCCTGT GGGATGAAGG TAACGACACT
GGTTTAACCA AAGCAAAATT TGGCTTTCAG CACTCTACCG AAACCAAAGC ACTTGAGCGC
TGGGATAACG AAGGCGTTGG TATTCACTGC ACCTACTGCG GCTACCCAGA TGCCCCAACA
ATACCCGCCG ATGCGCAATA TATTTTTGAT GCAGGCAGCG ACTTTTTAGG CGATGTAAGT
GGCAGCGGAC GTATGCCAAC CCAATGGCTA GCGCACGACG GCGAAGCCAA CTTTGCATTC
CTAGAAAGTT ATTACGCAAG TACCAATACA GATACAATTA GTTTTGACGC AGTAAAACGC
AACAATTCTT ATGAAATAAC AGAGGCAACT ACCGCCGCAT ATTTAGAATT AGAATTTGCT
GGCGAAATTG CTGATATGCG TATAGAAATG ACTTCTGGTG TACGCTTAGA AGAAACCACT
ACAGATGTAG ACGGCACTAC TGCGCCAGTT TCTGGGCTAA CCATTTTAGA TGAAACCGAG
ATGTTGGCAC AGTACGGCGC CGCGGATAGC ATTAGCTTAA GCACAGACTA CTCTTCTATA
TTACCTAACA TGAGCATCAA GTTAGATATT TCAGATAACT TAGTCGCCCG CGCCGCCGCG
TCCAAAACCA TCACTCGACC AACCCTAAAC AGTATGTCGC CGGTCACAGT TATCACCACA
ACACGTCAAG GTGGCGATTT AACATCTGCA AGTGGTAACC CAGCACTAGA ACCCTTTGAA
TCCGACAACT TGGATTTAAG TTTAGAGTGG TACTACGACG ACACGAGTTA TGTGTCTGCC
GGTTACTTCA AAAAAGACGT AGCCAACTTT ATCGTAAATG CGCAAGAAAG CAGAACCTTT
ACACTCCCTG ATGGTTCGTT ACTCACCGAT CCGTCAACCG GTTCCGATTC TGGTGCAGCA
GATGCAGGCG ATGACGTTGC TGTATTCACA AACACGTTAC CCAATAACGG TGAAAACGCT
ACAGTGGATG GCGTAGAGCT AGCGTTGCAA CATGCGTTTG GCGAAACAGG CTTCGGTATT
ATTGCCAACG CGACCATAGT AACAAGCGAT GCGGAGCTAG ACCCAGACGA TTTAAGCCAA
GTATTTGCGC TGCCAGGCTT AAGTGACTCG TTTAACTTAG TTGGCTACTA CGAACAAGGC
CCCTTCCAAG CACGACTCGC GTGGAACTGG CGTGACGAGT TTTTACAATC GCTTACCCAA
GGCCAAGGGG ACGGCCCAAC TATTGTTGAG GCGTATCAAC AATGGGACCT AAGTGGTAGC
TTCGATATTA ACGATAACGT GAGCATATTC GTAGAAGGTA TTAACCTAAC CGAAGAATAC
GTACACAAAC GTGGCCGCTA CGCCAACCAA CTGCTTCTAA TTGAGGACAG TGGACGTCGC
TTGGCACTGG GTGTGCGCGC AAGCTTCTAA
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| Protein sequence | MSHPNWRKNN VRSSIQQACI PQAAERNGRT IITAVTLGAL ISFSALAQAE TDTLEKVVRF
DIPQQRADIS LTEFAKQANI TLIFPFDDVK QLQTNSLQGE YSITDAVALL LRDTQLFVNI
GADGQLTILM EHDLGEIDSM HKKKLLSSAV IAALSSLTGA NAIAQQTSAP AGQVEEVLVT
GIRASLQRAM DVKRESGGVV DAISSEDIGK FPDTNLAESL QRITGVSIDR SGGEGQQITV
RGFGPQFNTV LVNGRQIASE DTSRAFNFDT VASELVKRLD VYKTSSATLQ SGGIGSTVNI
TTARPLDIGE FKVAGSAKAL MDGNSEETSP QISGMISNTF ADDTFGVLFA LSHQERSTRL
NQAQMDGWLE NVGVPNPMTE SGADWDGNVF SPRNYDHKVT FEDRKRTNAN LVLQYAPSDD
LTITGDLLYT DFDINTDTTS YGHWFTAPNI QGVGDDGSLF DTDGERRRPI VDENGTLIDL
YQEVGLATDM HAKTFDRLTE TTAIGLNAEW QANDNLQLVF DLSHSTSERE ANNGGGDQLS
LIGYANRVRF QVDNNILPLA SMFAEANPNI YSGQQEIDGA IIDDSDGFAG YDPAITPAGV
NDHLNKDNSR AHVMLRRGWA VEDAVTQFRM DGLWDEGNDT GLTKAKFGFQ HSTETKALER
WDNEGVGIHC TYCGYPDAPT IPADAQYIFD AGSDFLGDVS GSGRMPTQWL AHDGEANFAF
LESYYASTNT DTISFDAVKR NNSYEITEAT TAAYLELEFA GEIADMRIEM TSGVRLEETT
TDVDGTTAPV SGLTILDETE MLAQYGAADS ISLSTDYSSI LPNMSIKLDI SDNLVARAAA
SKTITRPTLN SMSPVTVITT TRQGGDLTSA SGNPALEPFE SDNLDLSLEW YYDDTSYVSA
GYFKKDVANF IVNAQESRTF TLPDGSLLTD PSTGSDSGAA DAGDDVAVFT NTLPNNGENA
TVDGVELALQ HAFGETGFGI IANATIVTSD AELDPDDLSQ VFALPGLSDS FNLVGYYEQG
PFQARLAWNW RDEFLQSLTQ GQGDGPTIVE AYQQWDLSGS FDINDNVSIF VEGINLTEEY
VHKRGRYANQ LLLIEDSGRR LALGVRASF
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