| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2385 |
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| Symbol | |
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| ID | 3967905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3024820 |
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| End bp | 3025833 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921476 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_527857 |
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| Protein GI | 90022030 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000797149 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTTT CTGGTTCTCA CATCTTATCG GTAGAGCAAT TCGAACGCGC AGATATAGAG
CGTATTTTTG CCGTTGCTGA TTCCATGGAG CCTTATGCCC TGCGTCAAAA GGTTACCCGC
GTGTTAGAGG GTGCCATTTT GGGCAATATG TTTTTCGAGC CCTCTACGCG TACCCGGGTA
AGTTTTGGTT GTGCTTTCAA CCTGTTGGGC GGGGAGGTAA GAGAGACCAC AGGTTTTAAA
AGTTCTGCCA TAGCAAAAGG CGAGTCGCTT TACGATACCG CGCGTGTACT GTCTGGTTAC
TCCGATGTAA TTTGCATGCG TCACCCGCAA GAAGGGTCTG TAGCTGAATT TGCCCAAGCG
AGTAGGGTGC CTGTAATTAA CGGTGGCGAT GGTGCCAATG AGCACCCAAG CCAAGCGCTG
CTCGACCTAT ACACCATTCA AAAAGAGCTG CGCGATAAAG GCCGCAGTTT AGATGGTTTG
CGTATCGCCA TGATTGGCGA CTTGAAGCAC GGTCGTACCG TTCACTCTTT AATGCGCTTA
TTGGGGTTGT TTGCAAATTT GCAGGTAGTG TTAGTTAGCC CAGAAGAGCT CGCCATGCCA
GAAGAGTACG TAGAATTGCT GCGCGGCTTG GGGCACAGAG TGGATGTATC GTCCGATTTG
GCCAACAGTA TTGGCCATGT TGATATTGTG TATTCTACTC GTATCCAAGA GGAGCGCTTC
GGCTCGAAAG AGGAGGCCGA CTTGTACCGT GGTCGATTCC GCTTAAACCA AGCTATTTAC
ACCCAGTTTT GCGAGCCAAA CACGGTAATT ATGCACCCGC TGCCACGCGA TTCTCGCTCC
GATGCGAATG AGTTAGATAA CGACTTAAAC CAAAACCCCA ACCTGGCAAT TTTCCGCCAA
ACCGATAACG GTATTTTGGT GCGAATGGCG CTGTTTGCAT TAATTTTGGA TGTTGCTGAT
CAAGTAGATA AATTCTCGCG ACCAGTAAAC TGGTACCACA GCCGCACATT TTAG
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| Protein sequence | MKFSGSHILS VEQFERADIE RIFAVADSME PYALRQKVTR VLEGAILGNM FFEPSTRTRV
SFGCAFNLLG GEVRETTGFK SSAIAKGESL YDTARVLSGY SDVICMRHPQ EGSVAEFAQA
SRVPVINGGD GANEHPSQAL LDLYTIQKEL RDKGRSLDGL RIAMIGDLKH GRTVHSLMRL
LGLFANLQVV LVSPEELAMP EEYVELLRGL GHRVDVSSDL ANSIGHVDIV YSTRIQEERF
GSKEEADLYR GRFRLNQAIY TQFCEPNTVI MHPLPRDSRS DANELDNDLN QNPNLAIFRQ
TDNGILVRMA LFALILDVAD QVDKFSRPVN WYHSRTF
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