Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2378 |
Symbol | |
ID | 3967372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3015770 |
End bp | 3016543 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637921469 |
Product | enoyl-CoA hydratase |
Protein accession | YP_527850 |
Protein GI | 90022023 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.285564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0124738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCTA GCCCAGAAGT ATTGGTGGAG CAGCGTGGCG CCACGCTAGA GGTAAGTTTT AACCGCCCAG ATCGTAAAAA CGCCATTAAT TTAGCTATGT ACCGCAGTTT AACGGCCGCG TTATTGCGAG CGAAGCAAGA TGCGACCACT CGCAGTGTAC TTATTTACGG GCAGGGAGGC ATTTTTACCT CTGGCAACGA CCTTAACGAT TTTGCCAACG CCTCTAACCT GCAAGATGAG AATAACCCCA TTGTTATCTT TATGCAGGCG TTGCTTAGCT TTCCAAAGCC TGTGGTGGTT GCGGTAGAGG GCGTGGCTGT GGGTATTGGT ACTACGCTAC TGCTACATTG TGATCTTGCC TATGGCCACA CAGATGCGCG TTTCGCATTG CCGTTTGTAA AATTAGGCCT GTGCCCAGAG TATGCATCTT CTTACCTTAT ACCCCGTATT GCTGGGGCTG CCAAAGCCAG CGAATGGCTG CTGTTAGGCG AAGAGTTTAG TGCGCAAGAG GCGAAAGAAG GCAATTTAAT TAATAGCGTA GAGGCTGCAC CCCTCGCTAA AGCCCGCGCG GCGTGCGATA AGCTTGCGTT GTTGCCGCCA GCCGCCGTTA GACAATCTAA AGCCCTACTT AAACAAACTA CCTCCGATAA CGTGCAACGG GTAATCGATA CCGAAATTGC ACTATTTGCT AAGGCGTTAA GCCAACCCGA ATTTGCAGAA GCGGTTGGGG CCTTCTTTGA GAAACGCAAA CCCGATTTCT CTCACTTTGA ATAA
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Protein sequence | MEPSPEVLVE QRGATLEVSF NRPDRKNAIN LAMYRSLTAA LLRAKQDATT RSVLIYGQGG IFTSGNDLND FANASNLQDE NNPIVIFMQA LLSFPKPVVV AVEGVAVGIG TTLLLHCDLA YGHTDARFAL PFVKLGLCPE YASSYLIPRI AGAAKASEWL LLGEEFSAQE AKEGNLINSV EAAPLAKARA ACDKLALLPP AAVRQSKALL KQTTSDNVQR VIDTEIALFA KALSQPEFAE AVGAFFEKRK PDFSHFE
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