Gene Sde_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2378 
Symbol 
ID3967372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3015770 
End bp3016543 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content50% 
IMG OID637921469 
Productenoyl-CoA hydratase 
Protein accessionYP_527850 
Protein GI90022023 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.285564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0124738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCTA GCCCAGAAGT ATTGGTGGAG CAGCGTGGCG CCACGCTAGA GGTAAGTTTT 
AACCGCCCAG ATCGTAAAAA CGCCATTAAT TTAGCTATGT ACCGCAGTTT AACGGCCGCG
TTATTGCGAG CGAAGCAAGA TGCGACCACT CGCAGTGTAC TTATTTACGG GCAGGGAGGC
ATTTTTACCT CTGGCAACGA CCTTAACGAT TTTGCCAACG CCTCTAACCT GCAAGATGAG
AATAACCCCA TTGTTATCTT TATGCAGGCG TTGCTTAGCT TTCCAAAGCC TGTGGTGGTT
GCGGTAGAGG GCGTGGCTGT GGGTATTGGT ACTACGCTAC TGCTACATTG TGATCTTGCC
TATGGCCACA CAGATGCGCG TTTCGCATTG CCGTTTGTAA AATTAGGCCT GTGCCCAGAG
TATGCATCTT CTTACCTTAT ACCCCGTATT GCTGGGGCTG CCAAAGCCAG CGAATGGCTG
CTGTTAGGCG AAGAGTTTAG TGCGCAAGAG GCGAAAGAAG GCAATTTAAT TAATAGCGTA
GAGGCTGCAC CCCTCGCTAA AGCCCGCGCG GCGTGCGATA AGCTTGCGTT GTTGCCGCCA
GCCGCCGTTA GACAATCTAA AGCCCTACTT AAACAAACTA CCTCCGATAA CGTGCAACGG
GTAATCGATA CCGAAATTGC ACTATTTGCT AAGGCGTTAA GCCAACCCGA ATTTGCAGAA
GCGGTTGGGG CCTTCTTTGA GAAACGCAAA CCCGATTTCT CTCACTTTGA ATAA
 
Protein sequence
MEPSPEVLVE QRGATLEVSF NRPDRKNAIN LAMYRSLTAA LLRAKQDATT RSVLIYGQGG 
IFTSGNDLND FANASNLQDE NNPIVIFMQA LLSFPKPVVV AVEGVAVGIG TTLLLHCDLA
YGHTDARFAL PFVKLGLCPE YASSYLIPRI AGAAKASEWL LLGEEFSAQE AKEGNLINSV
EAAPLAKARA ACDKLALLPP AAVRQSKALL KQTTSDNVQR VIDTEIALFA KALSQPEFAE
AVGAFFEKRK PDFSHFE