| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2377 |
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| Symbol | |
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| ID | 3967371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3014930 |
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| End bp | 3015751 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637921468 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_527849 |
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| Protein GI | 90022022 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0533857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG TATTTGATTT TAGTGGTCGC ACCGTTGTTG TAGTGGGCGG TACAAGTGGT
ATTAATCGCG GCGTTGCAGA ATGCTTTGCC CGCGCAGGTG CAAAGGTAGC TGTAGCCAGC
CGCAGCCAAG AAAAGGTGGA CGAAACCGTT GCAGCCTTGC AGCAAGCCGG TGCAGAGCAA
GCTATGGGGT TTGCAGCTGA TGTGCGCGAC GTAGATGCAA TTGCCGCAGG TTTACAAGGC
ATCGCCACTG TAATGGGTAG CATTGATGTA CTGGTGTCTG GTGCTGCGGG TAATTTCCCT
GCGCTGGCAG AAGATTTATC TGCAAATGGT TTTAAATCGG TAATCGATAT AGATCTGCTT
GGCACCTTTC ATGTAATGAA GGCGGCTTTC CCACACCTAA CCAAGCCAGG GGCGTCTATT
GTGAATATTT CCGCCCCGCA GGCATTTTTA CCCATGCAGG CGCAAACTCA CGTATGTGCG
GCCAAAGCGG GTGTAGATAT GGTTACCCGC TGCTTGGCCT TGGAGTGGGG GGAGCACGGT
ATTCGCGTTA ACTCGCTAGT GCCCGGCCCT ATTGAAGGCA CAGAAGGCAT GAAACGCCTG
GCGCCAACGC CCGAGCTTAT GGAGCTAGCA AAACAATCTG TGCCTTTACA GCGCCTAGGT
AAACCAGAAG ATATAGGCAA TATGTGCATG TATTTGGCGT CGGAGCAGGC CGCCTATGTG
AGTGGCGCAA TTATTCCTGT TGATGGCGGT TGGTCGCTGG CGGGCGCATC TGGCCTTAGC
CAAACGTTGG TGCAAATGCT CAAACAGCTT AAAAACATGT AA
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| Protein sequence | MSQVFDFSGR TVVVVGGTSG INRGVAECFA RAGAKVAVAS RSQEKVDETV AALQQAGAEQ
AMGFAADVRD VDAIAAGLQG IATVMGSIDV LVSGAAGNFP ALAEDLSANG FKSVIDIDLL
GTFHVMKAAF PHLTKPGASI VNISAPQAFL PMQAQTHVCA AKAGVDMVTR CLALEWGEHG
IRVNSLVPGP IEGTEGMKRL APTPELMELA KQSVPLQRLG KPEDIGNMCM YLASEQAAYV
SGAIIPVDGG WSLAGASGLS QTLVQMLKQL KNM
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