Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2371 |
Symbol | |
ID | 3967365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3000010 |
End bp | 3003084 |
Gene Length | 3075 bp |
Protein Length | 1024 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921462 |
Product | electron transport complex, RnfABCDGE type, G subunit |
Protein accession | YP_527843 |
Protein GI | 90022016 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.475276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.254542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCTA ATTTGCAGCA TACATCTCCG GTTCAAGCCC ACTACTTGGA CTTTTTAAAC ACCCTATCGC GCCGCGGTTT TAAGGGTGAT ATAAGCCCGG ATTACGCCAA CCGCACGGTT TTGGCTACAG ATAACTCCAT TTACCAAGTT CTGCCACAGG GCGTTGTTTA CCCTAAGCAC ACAGGCGACC TAATTCTTAT TACCCAGCTT GCCAACGAAG CGTTGTACCG CGATATAGTG CTTTCACCTC GCGGTGGCGG TACGGGTACT AATGGTCAAT CGTTAACCGA TGGCGTAGTG GTGGATATAT CCCGCCATAT GAACCAAATA CTAGAAATAA ACGTTGAAGA GCGCTGGGTA AAGGTGCAAA CAGGTGTAGT TAAAGATCAG CTGAATGCCT TTTTAAAGCC ACACGGCCTA TTTTTTGCCC CCGAGCTTTC TACCAGCAAC CGCGCCACTA TTGGCGGTAT GATTAATACC GATGCCTCGG GCCAAGGGTC TTGCTTGTAC GGTAAAACCC GCAATCACGT GCTAGAGCTG CAAACGGTTT TACTCGATGG CTCTGTGTTA AACAGCCAAA CTTTGGATGC ACAAGCCTAC GAGGCGCTTG CCGAACAGCA GGATCGCACT GGGCTAATCC ACCGTGTGGT AGATAGTATT TACAAAGAGC ACAAAACCAA AATCGACGAA GTGTTCCCCC CGCTAAACCG CTGCCTTACC GGTTACGATT TAGCTCACAT TCGCGACGAA AACGGCCAGT TTAACCTCAA CAACATTTTG TGCGGCAGCG AAGGTACTCT AGGTTTTATT ACCGAGGCCA AGCTCAACCT GTTAACTATT CCCAAACATT CTGCTCTTGT GGTTGTTAAG TACGGCGATT TTGAGAAATC GCTACGCGAC GCAACCGAGC TAATGAAAGC CAAACCAACA TCAATAGAAA CCATCGACTC TAAAGTACTT AATTTAGCGA TGAACGATTT TGTGTGGCAT CAGGTGGAAG AGTTTTTCCC CGACGATACC GCCGAGCCGG TGCAAGGTAT TAACTTTGTA GAATACACCG CCGACGATGA AGCCGAGCTA GACCAAAAAG TTCAAACGCT ATTAGATAAC TTAAAAGCTT CGGTGGCCGA CCCTAACAGC CCGCGCATAG GTTACGCCTT GGCAAAAGGC AGCGCTGCGG TTAACCGCAT ATGGGGCATG CGCAAACGCG CAGTGGGATT ACTAGGCAAC AAAGAAGGTG AAGCTCGCCC AGTACCCTTT GTGGAAGATA CGGCCGTGCC ACCCGAGCAC CTAGCCGATT TTATTATGGA GTTCCGAGAA ATACTGGATG CCTACAGATT AGAATACGGA ATGTTTGGCC ACGTAGATGC AGGCGTTTTG CACGTGCGCC CCGCCCTAGA TATGAAAGAC CCAGAACAAG CCAAAATCGC TTGGGAAATA TCCGACCGTG TGGCCGACCT TACCCATCAA TACCACGGTT TATTGTGGGG CGAGCACGGT AAAGGCGTGC GCTCTGAATA TGCGCCCCAA TTTTTTGGCG AGCTGTACCC GCAACTCCAA CGTATTAAAG CGACTTTCGA CCCATACAAT CAATTAAACC CGGGCAAAAT TGCTACCCCT TCGGATGAGC ACAACTTACT AAAAATTAAT GAAGTAACTA CCCGTGGCGA GTTAGATCGC GTAATTAGCA AACAAAGCTG GACCCAGTTT GAAGAAGCGG TTTACTGCAA CGGCAACGGC GCTTGCTTTA ACTGGAACAC GGCCGACCAG ATGTGCCCTT CCTATAAGGT AACCCGCCAA CGGGTAAATT CACCGAAGGG TCGCGCATCA CTTGTTCGTG AATGGTTAAA ATTATTATCG GAAAACAATT TCGATACAGT GGCAGCTGCC AAGCGCAAAA GTGCGCTAAC AGCGATAGCA GGTTTGCCCA AACGCCTATT TAGCAGCTTG CGTAAAAAGT TAGGTGTTTA CGACTTTTCG CACGAGGTGT ACGACTCGAT GGCTGCCTGT TTGGCATGTA AATCGTGTAC AGGCCAATGC CCCATTAAAG TGGATGTACC AGAATTTAGA AGTAAATTTT TATCCCTGTA CCACACCCGC TATATGCGCC CACTAAAAGA TTACCTCGTA GGCGCGCTGG AATTTATGCT ACCGGTATGC GCTAAATTCC CGAGTGTATA CAACTTTTTC ATGAAGCTAC GCTTTGTGCA ATTGCTGCTA GAAAAATGGG TAGGCTTTGT GGATGGCCCA CTGCTTACCG GTACGCGTTT AGCCGGTTAC AAACTTACGG TGGATGCAAA CGGCACACAG GCAGAAATAG AGCTGGCATC GCCCGATAAA CTTGCAAATT TAACCCAAGA GCAACGCGAG AAAACCGTTG TAATAGTACA GGATGCGTTT ACCAGTTACT TTGAAACCCA GCTGGTAATC GATACGATTC AATTGCTTAA ACAGCTAGGC TTTAACGCCC TACTGGCCCC ATACAAGGCC AATGGTAAAC CGCTACACGT ACACGGCTTT TTAGGCAGCT TTGCCGATAC CGCAGAAAAG AACGCAAAAA TGCTTAACAG TATTAGCGCT TGCGGTGTTG CACTAGTAGG TATCGACCCC TCCATGACCT TAACCTACCG CAGCGAATAT AAAAAATATT TAAGTAAGCA AGCAATGCCC AAGGTAGAGT TACTGCAGGA ATTTTTAGAT GCGCGCCTCT TGGCAGCAGA TACGAATGCA GAACAAAGCA TAGAATTTAA GCTTATGCCC CACTGCACAG AAACATCAAA TGCTGTGGGC ACCATTAAAA TGTGGCAATC GGTGTTTACA AAACTTGGCC ACAGCTTAAC TATTTTGAAC GCGGGTTGTT GCGGCATGTC TGGTACTTAC GGCCACGAGG CGCGCAACAA GGAGTCGTCT CAAGCCCTTT ACCAAATGAG CTGGCAAAAA CCTGTAGAGC AACACGCACC AAGTGGTACG CTGCTTGCCA CGGGTTATTC CTGTCGCAGC CAAGTTAAGC GCGAAGCGGG CGAAACTATT CTGCACCCTG TACAAGCGCT GCTGGCTAAT ATAACCGTAA GCTAA
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Protein sequence | MIPNLQHTSP VQAHYLDFLN TLSRRGFKGD ISPDYANRTV LATDNSIYQV LPQGVVYPKH TGDLILITQL ANEALYRDIV LSPRGGGTGT NGQSLTDGVV VDISRHMNQI LEINVEERWV KVQTGVVKDQ LNAFLKPHGL FFAPELSTSN RATIGGMINT DASGQGSCLY GKTRNHVLEL QTVLLDGSVL NSQTLDAQAY EALAEQQDRT GLIHRVVDSI YKEHKTKIDE VFPPLNRCLT GYDLAHIRDE NGQFNLNNIL CGSEGTLGFI TEAKLNLLTI PKHSALVVVK YGDFEKSLRD ATELMKAKPT SIETIDSKVL NLAMNDFVWH QVEEFFPDDT AEPVQGINFV EYTADDEAEL DQKVQTLLDN LKASVADPNS PRIGYALAKG SAAVNRIWGM RKRAVGLLGN KEGEARPVPF VEDTAVPPEH LADFIMEFRE ILDAYRLEYG MFGHVDAGVL HVRPALDMKD PEQAKIAWEI SDRVADLTHQ YHGLLWGEHG KGVRSEYAPQ FFGELYPQLQ RIKATFDPYN QLNPGKIATP SDEHNLLKIN EVTTRGELDR VISKQSWTQF EEAVYCNGNG ACFNWNTADQ MCPSYKVTRQ RVNSPKGRAS LVREWLKLLS ENNFDTVAAA KRKSALTAIA GLPKRLFSSL RKKLGVYDFS HEVYDSMAAC LACKSCTGQC PIKVDVPEFR SKFLSLYHTR YMRPLKDYLV GALEFMLPVC AKFPSVYNFF MKLRFVQLLL EKWVGFVDGP LLTGTRLAGY KLTVDANGTQ AEIELASPDK LANLTQEQRE KTVVIVQDAF TSYFETQLVI DTIQLLKQLG FNALLAPYKA NGKPLHVHGF LGSFADTAEK NAKMLNSISA CGVALVGIDP SMTLTYRSEY KKYLSKQAMP KVELLQEFLD ARLLAADTNA EQSIEFKLMP HCTETSNAVG TIKMWQSVFT KLGHSLTILN AGCCGMSGTY GHEARNKESS QALYQMSWQK PVEQHAPSGT LLATGYSCRS QVKREAGETI LHPVQALLAN ITVS
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