| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2365 |
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| Symbol | |
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| ID | 3967359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2994179 |
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| End bp | 2994745 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921456 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_527837 |
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| Protein GI | 90022010 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000514785 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCTGCCA TTATTCGTTT ATTCAAATCT AAGCCCAGCG CCAAAGATCG CTTTCAGGCT
TTATTGCGCC CCCACATCGA ACTGATGTAT CGCATGGCGT ACCGCCTCAC CCAGTCGCAA
TCGGAAGCAG AAGACCTAGT ACAAGATGTA CTTACCCGAC TAGCAAAACG CGTAGATGAA
ATGGAACAGG TGGAATCACT GCGCCCTTGG GTACTGCGCA TACTCCAAAA CAGATTTGTC
GACCTATACC GCCGCGAGCA AAACTCCCCA GTGGACTACC AAAGCGCGCA AGAAGACGAC
AGCGGTGAAG ACGACCGCTC TGGCGCCAAT GTACTTACCA CCGCCAGCGA TAGCACCAAC
GATATAAAAC GCCTAGAACT GCAGCAAGTA TTACAAGTTG CCCTAAACAA ACTGGACGAC
GTCCACAGAG ACGTTGTGAT GCTGCACGAT ATGGAAGGCT ACACCGCATT AGAGGTGGCA
GACATATTAG GCATAAACGT TGGCACAGTT AAATCGCGCT TACATAGGGC CAGAGACAAG
TTAAAAAAAT GGCTAGAAGA CTCATAG
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| Protein sequence | MSAIIRLFKS KPSAKDRFQA LLRPHIELMY RMAYRLTQSQ SEAEDLVQDV LTRLAKRVDE
MEQVESLRPW VLRILQNRFV DLYRREQNSP VDYQSAQEDD SGEDDRSGAN VLTTASDSTN
DIKRLELQQV LQVALNKLDD VHRDVVMLHD MEGYTALEVA DILGINVGTV KSRLHRARDK
LKKWLEDS
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