Gene Sde_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2364 
Symbol 
ID3967358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2993190 
End bp2994023 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID637921455 
Producthypothetical protein 
Protein accessionYP_527836 
Protein GI90022009 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000594582 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGC TCACGGTTGC TGCACTGATA CATTACCCGG TTAAATCCCT TGCCGGTATT 
GCACTTACAA GCGCAGAAAT AACCAGCAAA GGCATAAAAG GTGATAGAGA ATGGATGGTG
GTAAAGCAAA ACGGCAAAAT GCTTACCCAG CGCCAAGCGC CTAAAATGGT AACCATTCAA
CCAAAGCTAA GTGACCGTGG CTTAGAACTG CATGCCAATG GGCTAGACCC CATATTGGTA
GAAGAACCCA CCCATGAGGA TGCACTTAGC GTAAGCATTC ACGGCGACAA ATGTGAGGGC
TACCCAGCAA GCGCCGCAGT AAATGAGTGG TTAACCCAAG CCATTGGCTG GGAGACGCCA
CTAACCCTGG TGAAATACAC TAAACAAACT GCGCGTACAC CCGGCTCGCC AGAGCGCTTT
GGTCACGATG CCACCTACTT TGCCGACGCA GCCCCCTTTC TAATTGCCAA TACTGCCTCT
TTGGCGGCCT TAAATAGCTC GCTGAGTGAG CAACAATTAC CCAATGTAGA TATGCGCCAC
TTTAGGCCCA ACATTGTGCT GCAAGGCTTA CCCGCGTTTG CAGAGCACGA ACTACCTGCG
CTAAGCATTG GCGACAAAAC CTTTAAACTG GTGGACCACT GCCAACGCTG TGTGATGATT
ACCGTAAACC CAGATACGGG TGAAAACCTC GCCAAAGCCA TACCGTTTAA GCAGCTAGCA
GAGCTAAACC CCATGCCCAA TAACGCTAAA GCGCCCGCTT TCGGGGTAAA TGCCATACTT
CACAGCGAAA TTTCTGCATT TACAATTCAA GTAGGCGACA TTGTAGCCGT ATAA
 
Protein sequence
MTKLTVAALI HYPVKSLAGI ALTSAEITSK GIKGDREWMV VKQNGKMLTQ RQAPKMVTIQ 
PKLSDRGLEL HANGLDPILV EEPTHEDALS VSIHGDKCEG YPASAAVNEW LTQAIGWETP
LTLVKYTKQT ARTPGSPERF GHDATYFADA APFLIANTAS LAALNSSLSE QQLPNVDMRH
FRPNIVLQGL PAFAEHELPA LSIGDKTFKL VDHCQRCVMI TVNPDTGENL AKAIPFKQLA
ELNPMPNNAK APAFGVNAIL HSEISAFTIQ VGDIVAV