Gene Sde_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2362 
Symbol 
ID3967356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2992455 
End bp2992883 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content45% 
IMG OID637921453 
Producthypothetical protein 
Protein accessionYP_527834 
Protein GI90022007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0741011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA AATTAGTCAT ACCAGCTCCG CCTTTAGAAA TTCAACTAAA GCTCGACACC 
TACCCCGCTG CAGCTCGCAA AATGCTGCTT GCGCTACGTG CTCAAATATT TACATGCGCA
CACAACTTAA CCATTACAGA TTTAGTAGAA AGCCAAAAAT GGGGCGAAGC GGCGTATAGC
TGTAAAAGTG GCAGTACCTT GCGCATTGAC TACAAAGCCT CAAACCCCGA TTATTGCGCC
GTATATTTTC ACTGCCAAAG CAAATTAGTA GCAACGTTTA AAGCCCTTTA CGGCGATACG
TTTAAATATG AAGGTAAACG AGCCATTCTT TTACCCATAG CCCACGCTAT ACCAGAGCAG
TTAAACCACT GCATTCGCTT GGCTTTACAG TATCACCAAG TAAAACACTT GCCCCTACTA
GGCGCATAA
 
Protein sequence
MTAKLVIPAP PLEIQLKLDT YPAAARKMLL ALRAQIFTCA HNLTITDLVE SQKWGEAAYS 
CKSGSTLRID YKASNPDYCA VYFHCQSKLV ATFKALYGDT FKYEGKRAIL LPIAHAIPEQ
LNHCIRLALQ YHQVKHLPLL GA