| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2356 |
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| Symbol | |
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| ID | 3967389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2984748 |
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| End bp | 2985536 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921447 |
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| Product | uroporphyrinogen-III C-methyltransferase |
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| Protein accession | YP_527828 |
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| Protein GI | 90022001 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.463328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.682274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAATT CAAAACCTGG CAAAGTATGG TTAGTAGGCG CCGGCCCCGG TGACCCAGAT
TTACTAACTG TAAAAGCGCT TCGAGTTATA CAGAATGCAG ACCTTGTGTT ATTCGATAAC
CTCGTAAGCC AAGAAATTCG AGCTTTATTC CCTAAATCTG TGCCGGCCTT TTATGTAGGT
AAGTGCAAAG ATAATCACAG CATCGCACAA AAAGATTTAA ACAGCTTGCT CGTTAAAAAA
GCGGCCAAGG GTTTGAATGT TGTGCGCATT AAAGGCGGCG ACCCCTTCGT GTTTGGTCGT
GGCGGCGAAG AGTTACTTAC CCTTATTAAA GCCGGAGTAG ATGCCGAGGT TGTACCTGGT
ATTACATCTG CTTCTGGTTG CACAACCGCT GCAGGTATAC CGCTTACTCA TCGCGGTTTG
GCGCAAGGCT GCACTTTTGT AACAGCACAT GCAGAAACAG AGTTATCCGT AGACTGGAAC
GCGCTAGCGC AAATTAATCA TACGCTTGTT TTTTACATGG GTGTGAGTCG CGCAGAAATG
ATCGCCAGCA ACCTATTAAA AGCCGGCTTA AGTGCCGCAA CGCCAGTGGC CATTATCGAA
AATGGCTGTC GTGAAAACCA GCGCGAAGTA ATCGGCCAAA TAAAAGATTT GGTATCGCTG
GTAGCAAACA ACAACGTTCA ATCGCCTGCT CTCATTGTAG TAGGTGAGGT TGTTTCTCTT
GCAAATGATT TAAACCCCGA ATTAAGAGCT GCTGTGTCAG CCGAAACACT GAATCAACAC
GTGGCCTAA
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| Protein sequence | MSNSKPGKVW LVGAGPGDPD LLTVKALRVI QNADLVLFDN LVSQEIRALF PKSVPAFYVG
KCKDNHSIAQ KDLNSLLVKK AAKGLNVVRI KGGDPFVFGR GGEELLTLIK AGVDAEVVPG
ITSASGCTTA AGIPLTHRGL AQGCTFVTAH AETELSVDWN ALAQINHTLV FYMGVSRAEM
IASNLLKAGL SAATPVAIIE NGCRENQREV IGQIKDLVSL VANNNVQSPA LIVVGEVVSL
ANDLNPELRA AVSAETLNQH VA
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