| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2354 |
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| Symbol | |
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| ID | 3967387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2981822 |
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| End bp | 2982151 |
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| Gene Length | 330 bp |
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| Protein Length | 109 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637921445 |
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| Product | assimilatory nitrite reductase (NAD(P)H) small subunit |
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| Protein accession | YP_527826 |
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| Protein GI | 90021999 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0568758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.329857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATT TAAATTGGGA AACAGTTTGT GATGCCAGTG ACCTGCTGCC AGAAATTGGT
GCGCGCGCAT TGCTAGGTAA AGATCAAGTT GCAATGTTTC GTATTAAAGA CAAGTTGTTT
GCGGTAAACG CTATCGACCC CTTTACCAAT GCGGCAGTGC TAGCGCGCGG TATTGTTGGT
TCGCTAAAAA ATCAAATAGT CGTGGCCTCG CCACTGCTAA AGCAGCACTT TAATTTAGAA
ACCGGTAGCT GCTTAGAAGA CGAAACAGTA AGCATTAAAA CGTACGCAAT CCGTGAAAAT
GACGGAAAAA TTCAACTAGC GTTGAAATAA
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| Protein sequence | MSDLNWETVC DASDLLPEIG ARALLGKDQV AMFRIKDKLF AVNAIDPFTN AAVLARGIVG
SLKNQIVVAS PLLKQHFNLE TGSCLEDETV SIKTYAIREN DGKIQLALK
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