| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2311 |
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| Symbol | |
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| ID | 3968141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2935602 |
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| End bp | 2937920 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921402 |
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| Product | hypothetical protein |
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| Protein accession | YP_527783 |
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| Protein GI | 90021956 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.699121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0238538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGATA TCACGATGAA GAATAATAAA TTCAGGTCGT CTTTTACATT AAAAAAACTC
ACACCGTTTT TTGTTGCGGG CACCATGCTT GGCGGTTCCA ACGCCTGGGC TGGCTGCGAC
TATACGGTCA CTAATCAGTG GGGCTCAGGC TTTACTGGCA ACGTTCGTAT AACTAATAGC
GGTAACACGC CAACAAATGG TTGGGCTGTT AACTGGCAGT ACGCTGGCGA TAATCGTATT
AGTAATAGCT GGGGAGCACA GCTTTCAGGG TCGAACCCAT ACTCTGCCAC GGCAGAAAGC
TGGAATGCTG TTATTCAGCC TAGTCAGTCC ATAGAAATTG GGTTTCAAGG TACCGGCGAC
GGAAATGAAA TACCAACTAT AAATGGCGAT GTTTGCCAGA CTAGCAGCGG AAGTACTTCA
TCCAGCTCAT CTTCAAGTAC GTCTTCTAGC AGCTCTTCAA GCTCGTCCAC TAGCAGCTCT
TCAAACAGCT CTTCTAGCTC TAGCTCGTCC AGCTCGTCTA GCTCCTCCTC TGGCTCTACA
ACTGGATATA TTCATATAGA AGAGAATGAA CTTGGTTTTT GTTATGTACA AGGTTCCATT
GACTCCAACA ACGGTGGCTT TACCGGCACA GGCTTTGCCA ATACCGATAA CGTTAATGGC
TCACAGATTA ACTGGAAAGT AAATGTCGAC TTTGATGGAT ATTATGCGCT CGAATGGCGC
TATGCGAATG GCTCCGGCAC CGCGCGCACT GCAAGCGTTA GCGCTAATGG AGCACAAAGC
GAAATTTCCT TCCCTACAAC AGGTTCGTGG GATAGCTGGT TATTAGACAG CACTACCCTA
TTTTTAAAAG CTGGCGTAAA CGACGTAATA TTGAGCGCAA ATACAAGCAG TGGCCTAGCG
AACATAGATT CACTTACAGT GCACGGTGAT GGCGTAGCTG CGGCAGACTG TAATACTGAT
GGAAGCTCAA GCAGCAGCTC TAGTTCAAGC TCTAGTTCCA GCTCAACTTC TAGTAGCTCC
TCAAGTTCCA GCTCGTCTAG CACGTCCAGC TCTTCTGGTG GCCCGCAAAT ATTAAAAGCA
TTCCCCACCG CAGAAGGCTA CGGAAAAATA ACCGCAGGTG GTCGTGGTGG CGATGTCTAT
ATAGTTACAA ACCTGAATGA CTCAGGCGCG GGTAGTTTGC GTCAGGCCGT AGAGGCATCT
GGCCCTAGAA CCGTTGTGTT CGAAGTGTCT GGAACCATCA CTCTAAATAA ACCACTCACA
ATCAAAAATA ATAACATCAC AATAGCAGGA CAAACTGCAC CAGGCGATGG CATTACACTT
AGAAAGCACA ACTTTTCTAT CCAAGCTGAT GATGTCATCG TACGTTACAT ACGTGTTCGC
TTTGGTGATG AAACCCTAAC CGATTCTGAT GCGATTTCCA TGAGGTACCA AAAAAATATT
ATTTTGGATC ATGTGAGTGC TAGCTGGGGA GATGATGAAA CCTTATCTCT TTATCACGGC
GAAAATATCA CTGTGCAATG GAGCATGATT ACAGAGACCC TCAATCGTGG CGGCGAACAT
GCATTCGCAG CTATATGGGG TTCGCCTTTT AGTACCTTCC ACCACAATTT AATTGCTCAC
AATGTTGCGA GAAACGTTCG CTTTGCGTCG GGTTCCGGTT ATACGGATTA TCGTAACAAT
GTCGTATATA ACTGGGGCTA TAGCAGCACA CACGGAGGCG AAGCTCAACA AGTTGGCAAC
GCTAATTTTA ATTTCACCAC CGTCAATATG GTCGGCAACT ATTACAAACC TGGGCCGAGA
ACTGAATCTG GCGTTCGTAG TCGACTACTT ACACCTAACA CGCGTAACGG CGATGCGGAC
TTAGGTAGTT TTTACGTTTC TGGTAACCAC ATGGTTGGCA GCCCAAATGT AACTGCAGAC
AACTCGATTG GCGTATCGAA TAAAAATGCC TTAATAAGTA GCCCTTGGAA TTCAATGAAA
ATAGAAGGCG AACAAACAGC TGAGCAAGCA TATGAGTCAG TTCTTGCTTA CGCAGGTGCA
TCTAAAGTAC GCGACTCGGT AGATACTCGT ATTATTGAAG AAGTACGTAC AGGCACAGCT
ACTTATGGTG GAAACGGCAT AATTGAATCG CAGAATGAAG TGGGTGGTTG GCCACAACTT
AGAAGTGAAA CGCCCCCGCA AGACAGTGAT CGCGACGGAA TGCCAGATGA CTGGGAACGC
GCGAACAACC TAAATCCATT CAACGCAGCC GATAGAAACA CTAAAGACAG TATTGGCTAC
ACAATGTTAG AGCGATATAT TAACGGGCTT GTTGATTAA
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| Protein sequence | MRDITMKNNK FRSSFTLKKL TPFFVAGTML GGSNAWAGCD YTVTNQWGSG FTGNVRITNS
GNTPTNGWAV NWQYAGDNRI SNSWGAQLSG SNPYSATAES WNAVIQPSQS IEIGFQGTGD
GNEIPTINGD VCQTSSGSTS SSSSSSTSSS SSSSSSTSSS SNSSSSSSSS SSSSSSSGST
TGYIHIEENE LGFCYVQGSI DSNNGGFTGT GFANTDNVNG SQINWKVNVD FDGYYALEWR
YANGSGTART ASVSANGAQS EISFPTTGSW DSWLLDSTTL FLKAGVNDVI LSANTSSGLA
NIDSLTVHGD GVAAADCNTD GSSSSSSSSS SSSSSTSSSS SSSSSSSTSS SSGGPQILKA
FPTAEGYGKI TAGGRGGDVY IVTNLNDSGA GSLRQAVEAS GPRTVVFEVS GTITLNKPLT
IKNNNITIAG QTAPGDGITL RKHNFSIQAD DVIVRYIRVR FGDETLTDSD AISMRYQKNI
ILDHVSASWG DDETLSLYHG ENITVQWSMI TETLNRGGEH AFAAIWGSPF STFHHNLIAH
NVARNVRFAS GSGYTDYRNN VVYNWGYSST HGGEAQQVGN ANFNFTTVNM VGNYYKPGPR
TESGVRSRLL TPNTRNGDAD LGSFYVSGNH MVGSPNVTAD NSIGVSNKNA LISSPWNSMK
IEGEQTAEQA YESVLAYAGA SKVRDSVDTR IIEEVRTGTA TYGGNGIIES QNEVGGWPQL
RSETPPQDSD RDGMPDDWER ANNLNPFNAA DRNTKDSIGY TMLERYINGL VD
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