| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2308 |
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| Symbol | |
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| ID | 3968138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2932444 |
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| End bp | 2933979 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921399 |
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| Product | hypothetical protein |
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| Protein accession | YP_527780 |
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| Protein GI | 90021953 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00819182 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGCGAA TCCCCAAGGC TTGGCTGGCA CTTCCACTTG TACTGGGAAG TACCAATCTA
TACGCTCAAG TAACTTGCAG TATCTCTAAC ACCAATGTTT GGAATAACGG ATACACCGTT
AATGTTAATG TAACCAACAC AGGCTCTTCA CAGGTTGGTT CTTGGCAGGT TCCTATTAAT
TTTTCTGAGC CACCTCAAGT AAGCAGCGGC TGGAATGCAA TATTAAGCAC AAACGGAAAC
ACCGTAACTG CCGGCAATAT TGGTTGGAAT GGTAATTTAA ATCCCGGCCA AAGCGCCTCC
TTTGGTTTTC AAGGTGGCCA CGATGGCAGC TTTGTGGAGC CCACCTGCTC GGGCGGAGGC
TCTAGCACTA GCTCAAGCAG CTCTAGTAGT TCTAGCTCAA CAAGTTCTAC CAGTTCTTCA
TCCACAAGTT CAAGTAGCTC TTCTAGCTCC GGCGGCTCTG AACTTTTAAT CCAAGAAAAT
GCATCCGGCT TCTGCCGTGT GGACGGATCG ATAGATAACA ATAACTCAGG CTATACCGGT
AGTGGCTTTG CCAACACCGA GAACCAAAAC GGTTCCGCAG TTGAATACGC ACTTAACGTT
CCCTCTAATG GGAATTATCT CCTCGACGCT CGATATGCAA GCGCTACTAC ACGATCGGCT
AGCGTGGTAG TTAATGGATC TTCAGTAGGC AGCTTTAGTT TTCCATCTAC GGGTTCGTGG
ACAAGCTGGA CAGTTGACTC CGCCAACGTT CCGTTAAAAG GCGGGAATAA TATTGTTCGA
ATTGTTGCAA CTAACAGCAG CGGATTACCT AATATTGATT CATTAAAGGT AATAGGCACC
AACCCGTCAG CCGGCAGTTG TTCAAGCAAC TCGTCATCCA CTAGTTCATC GTCTAGCTCA
AGTTCATCAA GCAGTAACTC CGGTGGCAAA GGCTCTAGCT GCCGTTCTAC AGGCAGTCAA
TCTGTTTCCT CTACTATTAA AGTTACTAGC GGGACTTTCG ATGGGAACTG TAAAACGTAT
AACCCTACAA GTGCCCTTGG CGATGGCAGT CAATCAGAAA GCCAGAAACC GGCATTCCGA
GTGGAGAACG GCGCAACACT CAAAAACGTG ATTCTAGGCA ACAATGGCGT AGACGGTATT
CATGTTTATA ACGGCGGCAC CTTGGATAAC ATCCGCTGGA CCAATGTGGG TGAAGATGCA
ATGACCGTTA AATCTGAAGG AAACGTTACC GTTTCAAATA TTGAGGGTTA TGACGGTTCA
GATAAATTTA TACAAGTAAA CGCAGTTACC AACCTAAAGG TTTCTAATTG CATTGTAGAT
AAAATGGGTA AATTTTTACG TCAGAATGGC GGTAAAACTT TCGCTATGTC TGTAACCGTA
GATAATTGTG ATATCTCAAA TATGGGTGAA GGTGTTTTCC GCTCAGACAG CCCAAATGCA
ACAGCGAGAA TCACAAATAG CCGATTAAAA AATGCAGGCG ACATTTGTAT TGGTAAGTGG
AAAAGCTGCA CATCTTCCAA CATTACCAGC TTCTAA
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| Protein sequence | MLRIPKAWLA LPLVLGSTNL YAQVTCSISN TNVWNNGYTV NVNVTNTGSS QVGSWQVPIN
FSEPPQVSSG WNAILSTNGN TVTAGNIGWN GNLNPGQSAS FGFQGGHDGS FVEPTCSGGG
SSTSSSSSSS SSSTSSTSSS STSSSSSSSS GGSELLIQEN ASGFCRVDGS IDNNNSGYTG
SGFANTENQN GSAVEYALNV PSNGNYLLDA RYASATTRSA SVVVNGSSVG SFSFPSTGSW
TSWTVDSANV PLKGGNNIVR IVATNSSGLP NIDSLKVIGT NPSAGSCSSN SSSTSSSSSS
SSSSSNSGGK GSSCRSTGSQ SVSSTIKVTS GTFDGNCKTY NPTSALGDGS QSESQKPAFR
VENGATLKNV ILGNNGVDGI HVYNGGTLDN IRWTNVGEDA MTVKSEGNVT VSNIEGYDGS
DKFIQVNAVT NLKVSNCIVD KMGKFLRQNG GKTFAMSVTV DNCDISNMGE GVFRSDSPNA
TARITNSRLK NAGDICIGKW KSCTSSNITS F
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