| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2307 |
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| Symbol | |
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| ID | 3968137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2930063 |
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| End bp | 2931340 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921398 |
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| Product | pectate lyase |
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| Protein accession | YP_527779 |
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| Protein GI | 90021952 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00284023 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAAGT ATGCGCTATA TGTTGTGGCC TTGGTGGCTG GCGTAGTGGT TAGCTTAGCA
GCCTGCAGCA AGAGAGCTAC GCAGCAAGTA GAGACTGAAT TCTACGAGAT TAATGAGCGG
GGCGGAGATG ATGGTCGCCT GCTACGCGTT GTGAATTTAA ATAATCAGGG GGTTGGCTCT
TTGCGCTGGG CGTTGGCGCA GACAGGTGCT AGAAAAATAA TTTTCGATGT AGGGGGGGTG
ATAGATCTAG AAGAAAAATC GCTCAAGATT CGTGAAGCCC ATGTGACAAT CGCTGGAGAG
ACGGCCCCAT CACCGGGTAT CACCCTTATC AAGGGCGGAC TAAGAATAGA AACCCACAAT
GTCAAAGTTT CGCACCTTAT GATTAGGCCT GGTGACGCAG GGTACTCCAA AGGTCAAGGT
TGGAAACCCG ACGGCATAAC TATATATGGC AGCAAAGCGA GGCATGTTGT TATTGATCAT
TGCTCGGTTA CATGGGCTGT CGACGAAAAT ATCGCAGTAT CTGGCCCAGC AGATAAGGGG
GCAGAGGCTA CCGCGGGTAA GGTTCTTATT CGCAATTCAA TTATTGCCGA AGCGCTAAGC
AATGCATCCC ACCCAGAGGG GGAGCATTCT AAGGGCATAC TCATACACAA CAATGTGCAG
CATGTAAGCT TGGTTAACAA TTTGTTGGCT CACAATAGGC GAAGAAACCC TTATTTTAAG
GCGGGTACAA CGGGAATTGT AATTGGCAAT ATAATTTATA ACCCAGGGAA ACGTGCTATT
CATATGTCTT CGGGCCGTGC TGATGCTAGC CTGCCAACAC TGTCAATTAC AGGGAATTTG
TTTATTCCAG CAGCTAATAC TTCCCCCAAC CTTAGTTTGA TAAGCAACTA TGGAAAAATT
TATTCGAGTG GAAACTTGGT GCAGGGGGAG AGCAGGCCGA TAACTGATGG TAAAAGTATT
TCATTGACTG CGCCGCCGCT ACAGCAAGTA GGCATAAATT TAACCGATAC AGGTACACAA
AACGACTTTT GCCAAACCCT AAGCAACGCA GGTGCCCGCC CGTGGGACCC CGACCCGATT
GATATTAGAA TAAAAACACA ACTTTTGGCT GGCGAAGGAC GAATTATTGA TAGCCAGAGC
GAGGTTGGAG GCTACCCAAT ACATAACGTC AATAACAAAG AAACCGCTGA AGCAGGCTCT
ACGCAGGGGG ATGGTATGTT GCAGTTTGAT ACTGAGTTAT TGAGAAAAAT ACCAAACCTG
TGTAGTGGCA TGATGTAA
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| Protein sequence | MFKYALYVVA LVAGVVVSLA ACSKRATQQV ETEFYEINER GGDDGRLLRV VNLNNQGVGS
LRWALAQTGA RKIIFDVGGV IDLEEKSLKI REAHVTIAGE TAPSPGITLI KGGLRIETHN
VKVSHLMIRP GDAGYSKGQG WKPDGITIYG SKARHVVIDH CSVTWAVDEN IAVSGPADKG
AEATAGKVLI RNSIIAEALS NASHPEGEHS KGILIHNNVQ HVSLVNNLLA HNRRRNPYFK
AGTTGIVIGN IIYNPGKRAI HMSSGRADAS LPTLSITGNL FIPAANTSPN LSLISNYGKI
YSSGNLVQGE SRPITDGKSI SLTAPPLQQV GINLTDTGTQ NDFCQTLSNA GARPWDPDPI
DIRIKTQLLA GEGRIIDSQS EVGGYPIHNV NNKETAEAGS TQGDGMLQFD TELLRKIPNL
CSGMM
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