| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2288 |
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| Symbol | |
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| ID | 3967341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2910436 |
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| End bp | 2913219 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921379 |
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| Product | peptidase M24A |
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| Protein accession | YP_527760 |
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| Protein GI | 90021933 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000032845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000380326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTATAAAC GCTCAGCACT AAGCAGCAGC ATTGCAATTG CCGTTGCCCT AACTAGCCAA
TACAGCCTTG CACAAAACGA GGCCGACGCT AGCTTAGAAG AAGTGATAGT TACTGGTATT
CGCGGCAGCT TAACCAAAGC ACTGGATATG AAACGCGAAA ACACCCAAAT AGTGGATTCT
ATTGTTGCGG AAGATATTGG TAAGTTTCCA GACAATAACG TTGTAGAAGC CTTGCAGCGC
GTATCCGGCG TACAAGTTAC AGATCGCGGC GCAGGTGAAG TAAACACGGT GTCTATTCGC
GGTTTAACAG ACGTAACCAC CACCGTAAAT GGCCGTCAAA TATTCACCTC TACCGGCCGC
TCTGTAGCGC TTGCAGACAT CCCTGCCAGC TTGGTTGCGG GTGTAGATGT GTACAAAACA
CGCTCAGCCT CGCAAATTGA AAGTGGTATT GCAGGCCAAG TCGATATAAA AACACAGCGC
CCATTCAATT TTGATGGCAG CAAAGTGGTA ATAGCCGCTC GCGGTACCTA CCAAGAGCAA
GCAGAAAAAA CCGACCCCAA TTTAAGTGCG CTATTCAGCA ACCGCTGGGA AACCTCCGCC
GGTGAGTTTG GTGCACTGCT AAACGTATCG TTTGCGCAAA CAAATTACCG TGACCAAAGC
GTTACGCCCG GTGCGCAAGT GCCCTTTATG ACCGCCAATG CAGCTGATGG CTGGGTGCCT
TTTGAACGCA TCTTTCCTAC AGACGGCCGA GTAACAGAAA GCCCCATTTG GGAAGGCGGC
CTAGAAGAAG GCTTACCCGC TACCGAAGGC TCTACCTTGA CCATGAATGG CGAAGAAATA
GAGTACCTAC TTTCACGCGA TGCCATTTTC GCCAGCGACT TTACCGGTAA GCGCGAGCGC
CCCGCTTATA ACGTAGCGTT CCAATTTGCA CCCAACGAAA CATCCGAGTA CCTATTTGAA
GCCTTCTACA ACGGCTACCG CAACGAGTCA TTTAACTCTT TGTTATTTTC CTTTGCCGAT
TGGTGGGGCT CTTTAGACCC AGCCGATGAA GTAGTCACCT ACCCGGGCAC AAACATTGTT
AAAGAACGCA CTGTTTACAA TCCCTACGGC TTTAACAGCG GTGATTTAAC TGTAAGCCAA
ACAGATAGTT ATGTGTACGC TTTAGGCGGC AACTGGGATA TCGGCGATAA CCTAACATTA
GAATCTGAAA TAGTTCACCA AACCAGCGAA TACTCATCGG ACTTCTTCGC GATGCGAACC
GATAGAGTGG CACACGGTAT AGATGTCGAT TTCAATTCAT CTGGCGGTTT ACCTGCTTGG
GCATTTATCG ATAATCCCGA AACGGCAGAC GTTAACGAAG CAGACCTCAC CGATTCAGCC
CAATGGAATG TGGCCGAACT ATACGACAAT GGTGTAGAAG ACAAAGGTAC ATCCACCACC
TTCACTGTTG ACGGTTCATA CTCGTTATTT AATAGCTTTT TTACCAATAT AGATTTTGGT
GCTAGCTACG ATGTGCGTAC AGCACAAAGC GCTAACCGAG ATATAAATGG CTTTTTAGGT
CAGCCTCTTT CTTCGTTAGA TGCGGGTGCT TCCTACGTTA CTGAAGATTT CTATGATGGA
CGTGCAGATA TTCCAACCAC GTGGGTAGTG CCCAATGGCC ATTATATTTA TAGCCACCGC
GACGAGTTCC GCGATTTATA CGGGTTTACC TCTGAAGAAA ACATCGAGAA GTTATCGTTA
AAAACTAATT TTGATATCGA AGAAACCACA ACCGCGGTTT ACGTTCAAAC CGATTTCGAA
ACAGAACTAG GCAATGGTAC ATTGGGTGGC CAGTTTGGTG TGCGCTATGT GGGTTCAAGT
GCGGATATGA GCTTCTTCGA CAACGAAGAC TCAAGTACAG CAGACCGCAG CGACTCGGCC
TTATTACCAA GCCTTGTTTT AAAATACGAA TTTGCTAACG ACTTTATGGC GCGTTTTGCT
TACACAGAAA CATTGCGTCG CCCTGCATTT GGCCAGTTAA ACTCGTTTAT TTACTATAAC
GAGTCTGTTA CCAATACTGA CGGCACTGCC ACCGGTGGTA ACCCAGACCT TAAACCCGTT
GAATCGGTTA ACTTGGATTT ATCGCTAGAG TGGTATTTTG CCGAGGGCAG CGCCCTATAC
GGCACCTTGT TCCAACGCAA TATAGAAGGC TTTGTATTCG ATTCTCGCCA ACGTGTAAGT
TACCAAGGGC CAGACGATAC CGAAGCATCT GATTACATTT TAAGCCTGCC AGATAACGCA
TCTAACGGTG AGCTAAACGG GTTAGAATTG GGCTTGGTTT ATTTCCCCGA TAATTTACCC
AATGCATTAG ATGGCTTAGG CGTACAAGCA AGTTACACCA TGCTAGATTC CTCGCAAGAT
GTACCCGTGT TTGGCGCAGA TGGCGAGCTA GAAAAATACT TAACTCGCTC TATGTTTGGT
GTTTCAGATA ATTCTTATAG TGTTGTGGTT GCGTACGAAA AAGAGAAATT TAGCGCGCGC
TTATCGTTTC TTGCCCGCGA TAATTTCTTA AATAATTACG AAGCCGCCGT ATTCGCCAAC
CCACTAGGCG TATACCGCAA GCCAGAAAAG AGCATGGATT TGCAGTTGAG TTACGACGTA
ACCGACGATT TAATGCTAAC GTTTGATGCA ACCAACTTAA CCGATGAGGT TTTCCAAAGC
TATTACGAAA ACCCACAAAC CAACAACTTA GGCAACGCTA TCTACAGCCG CACCTTCTCG
TTGGGCTTGC GCTACACCTA CTAA
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| Protein sequence | MYKRSALSSS IAIAVALTSQ YSLAQNEADA SLEEVIVTGI RGSLTKALDM KRENTQIVDS
IVAEDIGKFP DNNVVEALQR VSGVQVTDRG AGEVNTVSIR GLTDVTTTVN GRQIFTSTGR
SVALADIPAS LVAGVDVYKT RSASQIESGI AGQVDIKTQR PFNFDGSKVV IAARGTYQEQ
AEKTDPNLSA LFSNRWETSA GEFGALLNVS FAQTNYRDQS VTPGAQVPFM TANAADGWVP
FERIFPTDGR VTESPIWEGG LEEGLPATEG STLTMNGEEI EYLLSRDAIF ASDFTGKRER
PAYNVAFQFA PNETSEYLFE AFYNGYRNES FNSLLFSFAD WWGSLDPADE VVTYPGTNIV
KERTVYNPYG FNSGDLTVSQ TDSYVYALGG NWDIGDNLTL ESEIVHQTSE YSSDFFAMRT
DRVAHGIDVD FNSSGGLPAW AFIDNPETAD VNEADLTDSA QWNVAELYDN GVEDKGTSTT
FTVDGSYSLF NSFFTNIDFG ASYDVRTAQS ANRDINGFLG QPLSSLDAGA SYVTEDFYDG
RADIPTTWVV PNGHYIYSHR DEFRDLYGFT SEENIEKLSL KTNFDIEETT TAVYVQTDFE
TELGNGTLGG QFGVRYVGSS ADMSFFDNED SSTADRSDSA LLPSLVLKYE FANDFMARFA
YTETLRRPAF GQLNSFIYYN ESVTNTDGTA TGGNPDLKPV ESVNLDLSLE WYFAEGSALY
GTLFQRNIEG FVFDSRQRVS YQGPDDTEAS DYILSLPDNA SNGELNGLEL GLVYFPDNLP
NALDGLGVQA SYTMLDSSQD VPVFGADGEL EKYLTRSMFG VSDNSYSVVV AYEKEKFSAR
LSFLARDNFL NNYEAAVFAN PLGVYRKPEK SMDLQLSYDV TDDLMLTFDA TNLTDEVFQS
YYENPQTNNL GNAIYSRTFS LGLRYTY
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