| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2286 |
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| Symbol | |
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| ID | 3967339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2908050 |
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| End bp | 2908604 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637921377 |
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| Product | hypothetical protein |
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| Protein accession | YP_527758 |
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| Protein GI | 90021931 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.172831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000015339 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGAAATC TTTTAAAACA AGCAGGATCA AAAATAATTG CATCAACAGC CATACTAGGA
CTATCACTCT CTGCACACGC AGGGTTGTTT GAGTATTCCT ACAGTTTTGG GAATGGCAAT
AGCGTAAGCG GCACACTTAC AGGCGATGTT AACGGCGCCT ATGTTCAAAA CGTAGAAGCC
GTAACACTTA CTATTAATAC CCAGGAATTA AATCAAACGT TTTACGATGT AGGCTTAACG
AATGGCAGCT GGAGTGGCGA CGCGATAGTT TCATTTGATG CAAGCCTAAA TAACTTTTTG
TTTAGCGATG TAAATTACCC ATCGCAAACA AATTACTCGG TGTTTTTCCA AATGATAAAC
TACGGGTCTA CGCACAACGC TAAAATATAC AACAAAAACC CAAGCGTATA CTCTTCCGAC
CGCCCCATTA ACGCGAGCGC ATGGTCGCTT ACCGAAGTAG CAAGCGTACC CGAACCCGCA
TCGCTAATAC TTTTTGGGCT AGGCCTTATA GGCGTTGCAG CTAGTCGCCG CAAAAATATG
AAAATTAGTA ACTAA
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| Protein sequence | MRNLLKQAGS KIIASTAILG LSLSAHAGLF EYSYSFGNGN SVSGTLTGDV NGAYVQNVEA
VTLTINTQEL NQTFYDVGLT NGSWSGDAIV SFDASLNNFL FSDVNYPSQT NYSVFFQMIN
YGSTHNAKIY NKNPSVYSSD RPINASAWSL TEVASVPEPA SLILFGLGLI GVAASRRKNM
KISN
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