| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2284 |
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| Symbol | |
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| ID | 3967337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2904952 |
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| End bp | 2906337 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637921375 |
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| Product | putative cation symporter |
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| Protein accession | YP_527756 |
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| Protein GI | 90021929 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00974122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCTCTC CAAACAGTCA AGTTAGCGTA AAAGAAAAAA TAGGGTATGG GTTTGGTGAC
TTTGCATCAT CCATGTTCTG GAAGCTTTTT AGCGTTTATT TAATGATTTT TTATACCGAT
GTATTCGGTA TTTCTGCCGC TGCAGTGGGC ACCATGTTTG TGGTTACTCG TCTGTGGGAC
TCTGTTAACG ACCCTATTAT GGGTATTATT GCCGACCGCA CCGAAACCAA GTGGGGGAAA
TTTAGGCCTT ACCTTATGTG GGGGGCAATA CCTTTCGCGC TTATCGGTAT TCTCACTTTT
ACCACACCAG ATATTTCGCA AAGCAATAAG CTTATTTATG CGTATGTAAC TTATACCATG
ATGATGATGG CCTATACGGC GGTTAACGTG CCTTACGCTT CACTGCTTGG AGTAATGTCT
AGTAACAGCT CAGATCGTAC CGCATTGGCT TCATACCGTA TGGTATTTGC GTTTGCGGGC
AGTATTTTTG CGTTTATTTT AATTGAGCCA TTGCTCGATA TATTCAGCAA TATGGGCGGC
GAAGAAAATG CCAAAGTAGG CTGGACGTTA ACCATAGCCG TATATGGCGT TATTGCAGCA
GTCTTGTTTT ATATGACCTT CGCTTGGACC AAAGAGCGAA TTGCGCCACC TAAAAATCAA
GAAGATAACC TGGGCGAAGA TGCAAAAAGT TTGCTAAAAA ATGTACCTTG GTTTGTGTTG
TTGGGTGCAG CGTTATGTAC CTTAGTGTTT AACAGCCTGC GCGATGGCGC TGCTGTGTTT
TATTTTAAGT ACACCTTTGA AAATCAAGAT ATAGCGTTAT TCGGTATGTC GCTAAGCCTT
ATTACCACCT ATTTGGTAGC GGGGCAGGTG GCCAATATTG TGGGTGTTAT GTTGGCTCAG
CCCATTTCAG ATCGTATTGG CAAGCGGTCT ACGTTTATTT GCGCAATGTT ATTAGCTACT
GTATTAAGTG GCTTATTTTA TTTCTTAGAC GAAAGTCAGT TGCTTAATAT TATTATATTG
CAGTGTTGTA TCAGCGCCTG TGCAGGTATT ATTTTCCCAC TTATGTGGTC TATGTATGCA
GATATTGCCG ACTTTGCCGA GCACTCATCC GGGCGCCGTG CGACAGGGTT AATTTTCTCG
TCGTCTTCTT TTGCGCAAAA AATGGGGTGG ACGTTTGGTG GTGCCGTTAC CGGTTGGTTA
CTTGCATTTT ACGGTTACGA AGCTAACCAA TTACAAAGCG AAGAAACTAA ACAGGGCTTG
CGCTTAATGG TTAGTGTATT CCCCGCAATT GGCGCGGCCA TGTCTGCGGG TTTTATGTTG
CAGTATAAGC TAACCGAAAA TGTGATGGAC GAAGTACACG CAGAATTAGC CGAGCGCAGA
AAATAG
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| Protein sequence | MVSPNSQVSV KEKIGYGFGD FASSMFWKLF SVYLMIFYTD VFGISAAAVG TMFVVTRLWD
SVNDPIMGII ADRTETKWGK FRPYLMWGAI PFALIGILTF TTPDISQSNK LIYAYVTYTM
MMMAYTAVNV PYASLLGVMS SNSSDRTALA SYRMVFAFAG SIFAFILIEP LLDIFSNMGG
EENAKVGWTL TIAVYGVIAA VLFYMTFAWT KERIAPPKNQ EDNLGEDAKS LLKNVPWFVL
LGAALCTLVF NSLRDGAAVF YFKYTFENQD IALFGMSLSL ITTYLVAGQV ANIVGVMLAQ
PISDRIGKRS TFICAMLLAT VLSGLFYFLD ESQLLNIIIL QCCISACAGI IFPLMWSMYA
DIADFAEHSS GRRATGLIFS SSSFAQKMGW TFGGAVTGWL LAFYGYEANQ LQSEETKQGL
RLMVSVFPAI GAAMSAGFML QYKLTENVMD EVHAELAERR K
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