| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2281 |
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| Symbol | |
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| ID | 3967957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2901189 |
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| End bp | 2902448 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921372 |
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| Product | ABC transporter, permease protein, putative |
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| Protein accession | YP_527753 |
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| Protein GI | 90021926 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0835073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATT TCGATAAATG GCAGGAAATA TATTTCTCGG TTAAGCAAAA CAAAATGCGC
ACTATACTTA CCGCGTTTGG TGTTTTTTGG GGAATATTAA TGCTTATGCT GCTGCTGGGT
GCCGGTAAAG GTTTACAAAA TGGCTCTAAT CGCAACTTTG GCTCAGACGA TCGCAGCAGT
ATTTGGATAT GGACCAGCAC CACATCGGTA TCGCATGCGG GCATACCTAA AGGGCGTTAC
ATACAGTTTT CTGAAGACGA TATGCACGCA ATCCGGCAAG CCATACCCGA CACCAAGCAT
ATTTCCGCAG AAATTATGGC TGGCCAGCGC TGGCGTAGAA CTATAAATGT TACCCATCAA
AATCGCACCG GCGCCTTTAG CGTTTATGGC GTAGGCGACG AATACTTTAA AATAAAAGTG
TTTATCGATT TACGCGCTGG TCGCACCTTA AGCGCACTGG ATGAACAAGA GTCGCGCAAG
GTTGTAATGA TAGGCACACG CGTTGCCGAA AAACTATTCC CCAACGGCGA ATCAGCCATA
GACAAATACG TTTACTTCCA CGGCATTGCT TTAAAAGTTG TTGGTGTATT TCACGACGAC
GCCCAACAAG GCAGAATGTC TGAACGCATT TATATGCCGC TTAGCACCTT CCAATTAACC
TTCGGCCAAG CTAAAAGAAT AAATGAAATT GTAGTTACAC CCAAGCAAGG GGTAGACCCG
TTTTTATTCG AATCGCAGGT GCTTGGCTTT TTAAAAACGC GTCACAAAGT GGCAATGGAA
GATAACCAAG CCATTAACGC CTATAACTAC GCTCGCCAAG CACAATCGGT TAACCAACTA
TTTACTGCCA TTAATTTTTT TGTGTGGTTT GTAGGTTTGG GCACACTTGC AGCGGGCATA
GTGGGCGTTA GCAACATAAT GATAATTACT GTGAAAGATC GCACCCGCGA AATAGGTGTA
CGTAAAGCGT TGGGCGCAAC CCCAGGCTCT ATAGTTAGCA TGATATTGTC GGAATCTGTA
CTTATAACCG CCTTGGCCGG CTATATAGGC TTGGTGTTGG GCATTGCCCT ACTCGAAGGT
GCCAACGCGC TAATTGTAGC CACAGGCAGT AACCTTGCGT ACTTTGATCG ACCAGAAGTC
GATTTAAACA CAGCCTTTAT TGCCCTAGGC ATTTTAGTGG GTGCTGGCGC GCTCGCGGGG
TTAGCACCAG CTCTGCACGC TTCGCGCATA ATGCCCATTG AAGCCATGCG AGAAGAATAA
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| Protein sequence | MFDFDKWQEI YFSVKQNKMR TILTAFGVFW GILMLMLLLG AGKGLQNGSN RNFGSDDRSS
IWIWTSTTSV SHAGIPKGRY IQFSEDDMHA IRQAIPDTKH ISAEIMAGQR WRRTINVTHQ
NRTGAFSVYG VGDEYFKIKV FIDLRAGRTL SALDEQESRK VVMIGTRVAE KLFPNGESAI
DKYVYFHGIA LKVVGVFHDD AQQGRMSERI YMPLSTFQLT FGQAKRINEI VVTPKQGVDP
FLFESQVLGF LKTRHKVAME DNQAINAYNY ARQAQSVNQL FTAINFFVWF VGLGTLAAGI
VGVSNIMIIT VKDRTREIGV RKALGATPGS IVSMILSESV LITALAGYIG LVLGIALLEG
ANALIVATGS NLAYFDRPEV DLNTAFIALG ILVGAGALAG LAPALHASRI MPIEAMREE
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