| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2280 |
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| Symbol | |
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| ID | 3967956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2900483 |
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| End bp | 2901184 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921371 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_527752 |
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| Protein GI | 90021925 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0760186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACAC TCAAAGACAT TCATAAATCC TATGGCGCGG GCAGCCAAAA GCTACATGTT
TTAAAAGGCA TAGATCTACA CATAGGCGCC GGTGAGATGG TCTCAATTAT GGGCTCATCT
GGCTCGGGTA AATCCACATT ACTTAACATA ATGGGCATTC TAGATTCCCA TGACCAAGGG
CAATACACCC TAGCCGATTG TGCAATTGGC CATCACCTAA GCGAGCGGCA AGCAGCGTTT
TTACGCAACC AACACCTTGG CTTTGTATTC CAGTCTTTTA ACTTATTGCC CTTTAAAAAT
GCCCTAGAAA ACATTGCACT ACCGCTTTAC TACCGCGGCA TTAACCGTAA AAAACGCAAC
AAACTCGCTG AGGAATATAT AGAACGCGTA GGCCTTGCCG ACCGTAAACT GCATATGCCA
GGCGAACTCT CGGGCGGGCA AAAACAGCGT ATCGCCATCG CTCGTGCGCT CATCTCAAAC
CCGCAAGTAA TATTAGCCGA TGAGCCCACC GGTGCATTGG ATAGCCAAAC CACCGAAGAG
GTTATGCAAA TATTTAAAGA AGTAAATGCC GAAGGCAAAA CCATTGTTAT AGTTACCCAC
GAAAACGACA TAGCCCAACA AACCCAAAGG CAAATTGTTT TTAAAGATGG CAATATCTTA
AGCGATAGCG CGCCAGCCAC CCCTGCGGCG ACAGCGAGCT AA
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| Protein sequence | MLTLKDIHKS YGAGSQKLHV LKGIDLHIGA GEMVSIMGSS GSGKSTLLNI MGILDSHDQG
QYTLADCAIG HHLSERQAAF LRNQHLGFVF QSFNLLPFKN ALENIALPLY YRGINRKKRN
KLAEEYIERV GLADRKLHMP GELSGGQKQR IAIARALISN PQVILADEPT GALDSQTTEE
VMQIFKEVNA EGKTIVIVTH ENDIAQQTQR QIVFKDGNIL SDSAPATPAA TAS
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