| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2272 |
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| Symbol | |
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| ID | 3967948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2887712 |
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| End bp | 2890087 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921363 |
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| Product | cellobiohydrolase A (1 4-beta-cellobiosidase A)-like |
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| Protein accession | YP_527744 |
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| Protein GI | 90021917 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGCTT CTAATAAAAA TAGTAAGCTG GCAAACTCTG AGCAACACCG CCCTTATAAA
ACCCGCACAG CGCGCTGGTT AACCGGGTCT GGGGTTATTG CTTCAAGTTT GCTTTTTTCT
GCGCAGAGTT TTGCGGCGCA ATGTGAATAC ATCATTAGCA ATGAATGGAA CAGCGGCTTT
ACTGGCGCAG TTCGCATTAC TAATAATGGC ACTACTCCCA TCAATGGCTG GGATGTTAGC
TGGCAGTATG CCGGCGATGC AGTCACCAGC AGCTGGAACG CGAATGTTTC TGGCTCGAAC
CCCGTTTCTG CTACACCATT AAGCTGGAAT GCCAACATTC AACCCGGTCA AAGCGTTGAG
TTTGGTTTTC AGGGCAGCAA AGCCGGCTCC AATGCAGAAA TTCCAACCGT TACCGGCGCG
GTATGTGATA GCGGCTCTAG CTCTTCCAGC TCCAGCTCAT CATCTAGTTC ATCAAGCTCT
TCTAGTAGCT CAAGCAGCAC TAGCAGCTCC TCGTCCAGCT CTTCAAGCAC CTCTTCGTCT
AGCTCATCAT CTGGCTCCAG TGGCACAGGT GGTATTGCGT GTACTGTAGG CAATGCGAAT
ATTTGGGGCT CGGGCTACCA GCTGGACATG CAAGTTGTTA ACAACGGCAC CGCTGCAGTA
AGCAGTTGGG ACGTAACCAT GGCATTCGGC GAGGCACCAC AGCGCACCGG TGGCTGGAAC
GCAAACTTTG TAGAGTCAGG CAATACCATT GTTGCGAGCA ACATTAGCTG GAACGGCAAC
CTCGCACCGG GGCAATCAGC TTCGTTTGGT ATTCAAGGGA ACCACGACGG CTCTTTTGGC
GGCGTAACCT GTAACGGCGC TTCAAGCTCT GGCTCGTCTA GTTCTGGCTC TAGCACCAGC
TCATCAAGTA GCTCATCCAG TTCGTCTGGC TCTAGCACTT CTAGCTCTAG CTCAAGCTCC
TCTACTGGTT CTACCTCTAG CTCTAGTAGC TCTTCAACTT CTAGCACTTC TTCAAGTTCT
AGCTCTAGCA CCAGCTCCAC GAGTTCTAGC TCCAGTTCTA GCTCGAGTAC ATCGTCTAGT
TCCAGCTCAT CTTCCTCAAG CTCTAGCTCT TCTACTTCAG GCAGTGGCGC AGGTTTTGAC
AACCCGTTCA TTGGCGGCAA GTGGTATGTA GACCCAGTAT GGTCAGCAAA AGCTGCAGCA
GAGCCAAACG GTTCACTTAT TGCCAACTAC AACACGGCAG TTTGGATGGA TCGCATTGGT
GCGATTGAAG GCCCAGAAGA TGGCGATGGT ATGGGCTTAG AAGAACACTT AGATGAAGCT
TTAGCACAAG GTGCAGACAT CTTTATGTTC GTGGTATACG ACCTACCAAA CCGCGACTGT
GCAGCTTTGG CCTCAAGTGG CGAACTACTC ATTGCCGAGA ACGGTTTTGA GCGCTATCAA
AATGAGTACA TTGGCCCAAT CGTAGATATA CTCAGCAAGC CCGCGTATTC TAGCTTGCGT
ATTATCGCGA TTATTGAAGT GGATTCTCTA CCCAACCTCG TTACCAACCT CAACATTCAA
AAATGTGTTG AAGCGAATGG CCCGGGTGGG TACGTAGACG GTATCCAACA TGCACTTAAC
GAGCTAAACA CGCTTGATAA TGTGTACCCA TACGTCGATA TTGCTCACTC AGGCTGGCTA
GGCTGGAGCG ACAACTTCGC CGGCGCCACC AAGCTTATTG GTGATGCAAT TAAAGGCACA
AACAAAGGTG TAAACAGTAT TGCAGGCTTT GTAAGTAACT CTTCTAACTA CACACCTGTG
ACTGAACCAT ACCTACCTAA CCCTACCTTG CAAATTGGTA GCAACCAAGT TCGATCTGCG
GATTTCTACG AGTGGACCAT GTACTTCGAA GAACTTAGCT TTGTACAAGA TTGGCGCCAA
GCCATGATTC AGCAAGGCTT CCCAGAATCA ATTGGTATGC TTATTGATAC CGCACGTAAT
GGCTGGGGTG GACCTGACCG TCCAACTGGT GAGTCTACAT CTACCGACCT CAACACCTAT
GTGAATGAAT CGCGTATAGA CCGCCGTCAG CATCGCGGAA ACTGGTGTAA CCAGCCCGGT
GGTGTTGGCT TCCGTCCGCA AGCGGCACCA GAACCAGGTG TAGACGCTTA CGTTTGGGTT
AAGCCACAAG GTGAGTCGGA TGGTATTAGT GATCCTAACT TCCCTATCGA CCCTAACGAC
CCAGCTAAAC AGCACGACCC AATGTGTGAT CCAAACGCAC CTAACCGCGA TAACAATGCG
GTTGGCACAG GCGCGCTAGA TAACGCTCCA CATGCTGGTC GCTGGTTCCC AGAAGCATTC
CAAATACTTA TAGAAAACGC CTACCCACCG CTATAG
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| Protein sequence | MLASNKNSKL ANSEQHRPYK TRTARWLTGS GVIASSLLFS AQSFAAQCEY IISNEWNSGF
TGAVRITNNG TTPINGWDVS WQYAGDAVTS SWNANVSGSN PVSATPLSWN ANIQPGQSVE
FGFQGSKAGS NAEIPTVTGA VCDSGSSSSS SSSSSSSSSS SSSSSSTSSS SSSSSSTSSS
SSSSGSSGTG GIACTVGNAN IWGSGYQLDM QVVNNGTAAV SSWDVTMAFG EAPQRTGGWN
ANFVESGNTI VASNISWNGN LAPGQSASFG IQGNHDGSFG GVTCNGASSS GSSSSGSSTS
SSSSSSSSSG SSTSSSSSSS STGSTSSSSS SSTSSTSSSS SSSTSSTSSS SSSSSSTSSS
SSSSSSSSSS STSGSGAGFD NPFIGGKWYV DPVWSAKAAA EPNGSLIANY NTAVWMDRIG
AIEGPEDGDG MGLEEHLDEA LAQGADIFMF VVYDLPNRDC AALASSGELL IAENGFERYQ
NEYIGPIVDI LSKPAYSSLR IIAIIEVDSL PNLVTNLNIQ KCVEANGPGG YVDGIQHALN
ELNTLDNVYP YVDIAHSGWL GWSDNFAGAT KLIGDAIKGT NKGVNSIAGF VSNSSNYTPV
TEPYLPNPTL QIGSNQVRSA DFYEWTMYFE ELSFVQDWRQ AMIQQGFPES IGMLIDTARN
GWGGPDRPTG ESTSTDLNTY VNESRIDRRQ HRGNWCNQPG GVGFRPQAAP EPGVDAYVWV
KPQGESDGIS DPNFPIDPND PAKQHDPMCD PNAPNRDNNA VGTGALDNAP HAGRWFPEAF
QILIENAYPP L
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