| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2265 |
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| Symbol | |
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| ID | 3967941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2875364 |
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| End bp | 2876377 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921356 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_527737 |
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| Protein GI | 90021910 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.20736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAG TAATCAATTT TCTACAGCTA TCTGGATTAA CCTGGTTCGT GCCCATGGTT
CGTATTGCAG CTGGAGAAAA CCCAAAAACA CAAGCCAAAG AATTATGGAT GGTAATGGGT
ATACCTATTG TTGCCTTTGT CATCTTTTTA TTACTGTGGG GCCAATTATC TAGCAAAGTT
GTTACTAGCC TTGGCACCGT GCCCGGCCCA TCACAAGTTT ACACTCAAGC GGTTGCCCTG
TGGGATGACC ACAAAGCACA ACGTGAAAAA GCAGCGGCTT TTTACGAGCG CCAAGAAAAG
CGCAATGCAA AATTAGTAGA AGCGGGTAAA CAAGACCGTG TTAAATGGCG CGATTACACT
GGTGCCCCCA CCTACTTAGA TCAAATTGTT ACCAGTATTA AAACCGTATT TATGGGTTTC
TTGTTGGCAA CCATTGTCGC GGTACCCCTC GGTATTTTCT GCGGCCTAAG CCCAACCGTT
AGCTCTGCAT TTAACCCAAT TATTCAGCTA TTTAAGCCGG TATCACCGCT TGCTTGGCTC
CCCATTGTTA CCATGATTGT AAGTGCTACT TATGTTACTT CCGACGATTC ATGGTTTACC
AAATCATTTT TAAACTCGGC TATTACCGTA ACCCTATGCT CACTCTGGCC AACGCTTATT
AACACTGCGT TAGGTGTGGC GTCTATCGAC AAAGACCTAA TGAACGTGGG TAAAGTACTG
CAACTTGGCT GGTTTACTAA AATCACCAAA CTCGTTCTAC CCTCTTCGCT ACCACTTATA
TTTACCGGTT TGCGCTTGTC TCTTGGTGTG GGCTGGATGG TACTCATCGC CGCAGAAATG
CTTTCGCAAA ACCCAGGCTT AGGAAAGTTT GTGTGGGATG AATTCCAAAA CGGTTCTTCT
AACTCACTTA GCAAAATTAT GGTGGCGGTA CTTACCATTG GCGTAATTGG CTTCTTATTA
GACCGCGTTA TGTTCACCTT ACAAAACCTA TTTACCTTTG GCGAAAAGCG CTAA
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| Protein sequence | MNKVINFLQL SGLTWFVPMV RIAAGENPKT QAKELWMVMG IPIVAFVIFL LLWGQLSSKV
VTSLGTVPGP SQVYTQAVAL WDDHKAQREK AAAFYERQEK RNAKLVEAGK QDRVKWRDYT
GAPTYLDQIV TSIKTVFMGF LLATIVAVPL GIFCGLSPTV SSAFNPIIQL FKPVSPLAWL
PIVTMIVSAT YVTSDDSWFT KSFLNSAITV TLCSLWPTLI NTALGVASID KDLMNVGKVL
QLGWFTKITK LVLPSSLPLI FTGLRLSLGV GWMVLIAAEM LSQNPGLGKF VWDEFQNGSS
NSLSKIMVAV LTIGVIGFLL DRVMFTLQNL FTFGEKR
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