| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2264 |
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| Symbol | |
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| ID | 3967940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2873857 |
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| End bp | 2875269 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921355 |
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| Product | histidine kinase |
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| Protein accession | YP_527736 |
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| Protein GI | 90021909 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00574253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAA CTTTGCAACA CGCAAGTCGA AAATTAAGCC CCACATTTTC GAGCGTAAAA
AAACTAGCTG CGCCATTTGC ACTACTTATG GCATCCAGTG CCTACGCAGA AATGTTAGAC
GTAGAAAAAG ATGAATTAAC ATTTGGCTTT ATTAAACTAA CCGATATGGC ACCACTGGCC
ATTGCAGCGG AAAAAGGCTT TTTTGAAGAC GAAGGCTTAT TCGTTAAATT AGAAGCGCAA
GCAAACTGGA AAGTATTATT AGACGGCGTT ATTGACGGCA AACTCGATGG CGCGCACATG
CTAGCAGGAC AACCACTAGG TGCAACTATC GGCTACGGTA CCTCAGCACA TATCGTTACC
GCCTTTAGTA TGGATTTAAA TGGCAATGGC ATTACAGTTT CCAACGAAAT TTGGGAACAA
ATGAAAGGCA ATATCCCTCA CGAAAACGGC AAACCTGTTC ACCCAATTAG CGCGAGTGCA
TTAAAACCCG TTATCGAAAA ATATCGCAAC GAAGGCAAAC CCTTCAACAT GGGCATGGTG
TTTCCTGTAT CTACCCATAA CTACGAATTG CGCTACTGGC TAGCAGCAGG CGGCATAAAC
CCGGGCTACT ACGGCCCAGG TGCATCAGGT AATGTTGGTC AAATTGCAGG CGACACGCTG
CTTTCTGTAA CTCCTCCACC GCAAATGCCA GCCACAATGG AAGCCGGCAC CATTTATGGC
TACTGCGTAG GCGAACCTTG GAACCAACAG GCTGTATTTA AAGGTATTGG CGTACCGGTA
ATTACCGATT ACGAAATTTG GAAAAACAAT CCAGAAAAAG TATTTGGGGT TAACTCAAAA
TGGGCAGAAG AAAATCCACA AACTCACCTA GCTGTTGTTA AAGCACTTAT TCGCGCAGCG
ATTTGGTTGG ATGAGAACAA CAACGCCAAC CGCAAAGAAG CCGTAAAAAT TCTTTCTAAC
CCTAACTACG TAGGTGCAGA CTACGAAGTT ATTGCCAACT CTATGACCGG TACTTTCGAG
TACGAAAAAG GCGATAAACG CGAAGTGCCA GACTTCAACG TATTCTTCCG CTACTTCGCA
AACTACCCCT ACTACTCAGA TGCTATTTGG TACCTCACTC AAATGCGTCG CTGGGGCCAA
ATTGCTGAAG ATAAACCAGA TTCTTGGTAC CACGAAACCG CCAAAAAAGT ATACAAGCCA
GACGTATACC TAGAAGCAGC CAAACTTTTA GTTGCTGAAG GTAAAGCCAA AAAAGAGGAC
TTCCCTTTCG ATACCGACGG CTACCGCGCA CCACAAGCTG AATTTATCGA CAACATTACC
TTCGACGGTC GCGAGCCAAA TGCTTACTTA GCCAAACTAC CCATTGGCTT AAAAGCAGGC
GAAAAAGTAA CAAGCGCTGG TGTAACCAAA TAA
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| Protein sequence | MFKTLQHASR KLSPTFSSVK KLAAPFALLM ASSAYAEMLD VEKDELTFGF IKLTDMAPLA
IAAEKGFFED EGLFVKLEAQ ANWKVLLDGV IDGKLDGAHM LAGQPLGATI GYGTSAHIVT
AFSMDLNGNG ITVSNEIWEQ MKGNIPHENG KPVHPISASA LKPVIEKYRN EGKPFNMGMV
FPVSTHNYEL RYWLAAGGIN PGYYGPGASG NVGQIAGDTL LSVTPPPQMP ATMEAGTIYG
YCVGEPWNQQ AVFKGIGVPV ITDYEIWKNN PEKVFGVNSK WAEENPQTHL AVVKALIRAA
IWLDENNNAN RKEAVKILSN PNYVGADYEV IANSMTGTFE YEKGDKREVP DFNVFFRYFA
NYPYYSDAIW YLTQMRRWGQ IAEDKPDSWY HETAKKVYKP DVYLEAAKLL VAEGKAKKED
FPFDTDGYRA PQAEFIDNIT FDGREPNAYL AKLPIGLKAG EKVTSAGVTK
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