| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2255 |
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| Symbol | |
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| ID | 3967931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2862297 |
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| End bp | 2863265 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921346 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_527727 |
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| Protein GI | 90021900 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.333338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.44262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATT GGACCCAATT AAATACTGCC GCAACCACCA CGCCAACCTC TGCTAAAAGC
TGGCAGTGCG CCATTCCACT CCTCGACCAC GTGCTAATAG AAGTGAAAGG CCCAGATGCG
GAAAAATTTC TTCAAGGCCA ATGCACGTGT GATTTTAAGA GCATTGCCAA CGGTAAGTTT
TCGCTCGGCG CCCACTGCAA CGTTAAGGGG CGCATGGTAA GCAGCTTTAC AGCCGCAAAA
CTGGGGCCAG AGCACTTTGG CTTACGCACC CATAAAAGCA ATGCCGAAAA AGCACTAGCC
ACACTTAAAA AGTATGCGGT ATTTTCTAAG GTTAGCCTCG AAATATCTTC ATCACTGGCT
GCGGTAGCAG TGTTTAATAC TCAGGCAAAT GAAGTACCGT TTTTTAATGC TACAGCCGAA
GTGGGCTGTA GCACAGCGTT AGAGCAAGGT GCGTGTTTAG CCCATACCAA CAGTATGCAA
GAGCTATGGC TAGCGCGCGA AAACATACAA CAATTACTTG AACAATTACC AGTAGCTGCA
CCGCACTATT GGACGGCCTA CAACATTGCT CAAGGCGTTG CCGAAGTAAC TGCCGACTCG
ACTGAGCAAT TAATCCCCCA AGAAATCAAC TTACAATTGC TTGGCGGCGT CTCGTTTAAT
AAAGGGTGCT ATACCGGCCA AGAAATTGTC GCGCGCATGC ACTACAAAGC CACCCTCAAA
AAACACATGT ATCGCGCCCA ACTCGCGCCG TCAACTAGCG CCCCAGCCAC TGGCACAGCG
CTTATAAACG AAGAAGGGAA AAACGTGGGG CAAGTTGTAC AAAGTGTAAC CACTGATGCT
GGAGCGCAAA TTTTAGCCCT AACGCTAGAT ACCGCTGCAC ATAGCAAAAA TGTGCACTGT
GAGGCAAACC CGCAACAAAA ACTTCAATGG CTGGCGCTAC CATATGCTAT ACCTTTAACT
GAGAATTAA
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| Protein sequence | MFDWTQLNTA ATTTPTSAKS WQCAIPLLDH VLIEVKGPDA EKFLQGQCTC DFKSIANGKF
SLGAHCNVKG RMVSSFTAAK LGPEHFGLRT HKSNAEKALA TLKKYAVFSK VSLEISSSLA
AVAVFNTQAN EVPFFNATAE VGCSTALEQG ACLAHTNSMQ ELWLARENIQ QLLEQLPVAA
PHYWTAYNIA QGVAEVTADS TEQLIPQEIN LQLLGGVSFN KGCYTGQEIV ARMHYKATLK
KHMYRAQLAP STSAPATGTA LINEEGKNVG QVVQSVTTDA GAQILALTLD TAAHSKNVHC
EANPQQKLQW LALPYAIPLT EN
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