| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2249 |
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| Symbol | |
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| ID | 3967925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2856601 |
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| End bp | 2857686 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921340 |
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| Product | putative sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_527721 |
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| Protein GI | 90021894 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000014172 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.025452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG CTTTATCGCT AGCGATTGTG CTGGCTGTAG TGGGGGTGTC CCCTGCAGTC
AGTGCTCTAG ACAAAACCTC CTCTGTAGCC GAAATTCTCA ATCAGCTCGG CAATTCCACC
AAATCCCAAA ATTACCGCGG TGAATTCACG TACGAACACG ATGGCACCAT CGATATGTTG
CGTGTTGTAC ACGCTGTAAT TGATGGCGTT GAGTACGAGC GTATTTACCA CCTTAATGGG
CCAGAAAAGT CCTTTATGCG TGAAGGGCAG AGTATTGACT GTGTTACGGC AGGTAATCAT
CTTTTACGCG GTCGAAGGCT TACGTTATCC AGCGGGCGTA TGGTGAGTAT TGATCAGAAC
TATCAATTCC ATATGCGAGG CGAAGAGCGT ATTGCAGGTC GAGAGGCGTT AATACTGCAA
TTGCTCCCCA AAGACCCTTA TCGATACGGC ATGGTACTAG GTGTAGATAA GCAAACGGGC
TTGTTGACCA AGGCCGTTAT TACCGAGGGG CAGAAAAAGG TATGGGAGCG TATTCAGTTT
GTTTCGTTGA GCTTAGACGA CGATATGGGG ATAGAAGCTA TTTACCCTGA CCTCGCTACG
GGCAAATCCA GTTTGGCGCC TTTGGTTGAG TCCTCCATGG TGGACGGCTC CGTGGTAGAT
GGCTCCGTGA CCACCGAAGT ACCGGCTTCC CCAGAAGGAA GTATGATTGA TAATTCGAGC
GAAGCGAGTG CTAGTGCAGA GCCGCCGGCG AATGACGCTG ATCAAGATTG CCGTCAGCCC
GCAGCATCTA AAGCACCGCT CCAACCTGCA TGGGTGCCCA ATGGTTTTGT GTTGTCCGAC
TACTCTTATT CTGATGAAGA CGGGCATATG GAAACCTATA CCGACGGCCT TTCAGTATTT
TCTATCTTTA TTGGTCGTGT TACCGATAAG CCTTCTCAGG CAGTTGTTCG AAATGGGGCA
ACAGTTAGCT TATTAACCAG TGTGCCCAGC GATAACCAAT TCGTAACAAT TACTGTTGTG
GGTGAGGTGC CTGCGGTTAC CGCGCACCGC GTTACGCAGT CGTTGCGCGT GCCTGTAGTT
AAATAG
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| Protein sequence | MKIALSLAIV LAVVGVSPAV SALDKTSSVA EILNQLGNST KSQNYRGEFT YEHDGTIDML
RVVHAVIDGV EYERIYHLNG PEKSFMREGQ SIDCVTAGNH LLRGRRLTLS SGRMVSIDQN
YQFHMRGEER IAGREALILQ LLPKDPYRYG MVLGVDKQTG LLTKAVITEG QKKVWERIQF
VSLSLDDDMG IEAIYPDLAT GKSSLAPLVE SSMVDGSVVD GSVTTEVPAS PEGSMIDNSS
EASASAEPPA NDADQDCRQP AASKAPLQPA WVPNGFVLSD YSYSDEDGHM ETYTDGLSVF
SIFIGRVTDK PSQAVVRNGA TVSLLTSVPS DNQFVTITVV GEVPAVTAHR VTQSLRVPVV
K
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