| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2247 |
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| Symbol | |
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| ID | 3967923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2854507 |
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| End bp | 2855901 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921338 |
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| Product | ATPase |
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| Protein accession | YP_527719 |
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| Protein GI | 90021892 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000505452 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0343548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGCA TCTCATCTTG GCTGTTGGTT TTTTGTGTGC TTACTTTCAC GGGCGTGGCC
AACGCTAATC TGCCAGATTT TAGTGATCTA ATAGAGCGGT CGTCACCCGC TGTAGTAAAA
ATTAATACGT CTGCAAATGT GGCTCAGGGG CGATTACAGT TGCCACAAGG GCAGCAAGTG
CCAGAGTGGT TTAAACACTT CTTAGACCCA GGGCGGCAAG GAATTAGGCC AAACCAACGT
GTTCAATCGA TGGGGTCCGG TTTTTTTATT TCTGCCGATG GTTATGTAAT TACCAATCAC
CACGTTATTG ATAATGCCGA TGAAATAACC GTTGAGCTTG TCGATCGAAG AGAATACCCA
GCCACCGTCG TTGGGGTGGA CCCACGGTCC GATTTGGCGT TATTAAAAAT AGACGAAGAC
AATCTTCCAT TCCTGAAGGT TGCTGAAGGT TCGCCCTTAA AAGTGGGTGA GTGGGTAGTG
GCCATTGGTT CGCCATTTGG GCTTAAGTTT TCGGCGAGTG CCGGTATTGT AAGTGCAATA
GGGCGTAGCA TACGCAATCA GTCTGGTGAA GATTACGTGC CCTTTGTGCA AACGGATGTA
GCTATAAACC CCGGCAATTC GGGTGGCCCA CTGTTTAACC TTAAAGGGGA GGTTGTCGGC
GTTAACTCGC AAATCTATTC CCAGTCCGGC GGCTCTATCG GTTTGTCGTT CGCCATCCCA
TCAAGTGTAG TTAATAACGT TGTTAAGCAG TTGAAAGAAA AAGGCACAGT TTCACGCGGT
TGGTTAGGTG TGGTTATTCA AGAGGTAGAC GGAGACTTGG CCGCATCTTT CGGTTTAGAT
AGACCGCGCG GTGCTTTAGT GAGCGAAGTG TTGGAAGATT CGCCCGCAGA AAAAGGCGGT
TTGCAGCCCG GTGATGTCAT TGTGTCTTTC GATGGTGGTG AAATTCTCAC TTCTAGTGAT
TTACCTCACC TTGTTGGAGC AACTCAGCCC GAGTCCAAAG TAGATGTTGA GGTTGTGCGC
AAAGGCAAAA CCAAAAAGCT AAAAGTGGAA GTTGGCGCTC TGCCTGGGGC TGATGCTGTT
GCCACGCTAG GTGGAGGACC TGGGGCGGCT AAAGGCGGGG TGCTTGGTGT GCAAGTAACT
GATGCACCTA AGGATTTACT GGAGCAGTTG AAGCTGGATG GCGGCGTGCT TGTGCAGGCT
GTAGCGCCAA ATAGCCCAGC AAGCAACGCG GGCATTAAGG CTGGCGATGT AATTTCTGAA
GTGAATTTCA TCGAGGTTAA AAGTGTAAAA TCTCTTCAAA AAGTCGCCAA AGAGTTACCC
AAAGGTAAGT TGTTGCCCAT TCGATTCTTT AGCGATGGCC GCCCCGTATT TAGAACAATC
AAAATAGCTG AATAA
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| Protein sequence | MVRISSWLLV FCVLTFTGVA NANLPDFSDL IERSSPAVVK INTSANVAQG RLQLPQGQQV
PEWFKHFLDP GRQGIRPNQR VQSMGSGFFI SADGYVITNH HVIDNADEIT VELVDRREYP
ATVVGVDPRS DLALLKIDED NLPFLKVAEG SPLKVGEWVV AIGSPFGLKF SASAGIVSAI
GRSIRNQSGE DYVPFVQTDV AINPGNSGGP LFNLKGEVVG VNSQIYSQSG GSIGLSFAIP
SSVVNNVVKQ LKEKGTVSRG WLGVVIQEVD GDLAASFGLD RPRGALVSEV LEDSPAEKGG
LQPGDVIVSF DGGEILTSSD LPHLVGATQP ESKVDVEVVR KGKTKKLKVE VGALPGADAV
ATLGGGPGAA KGGVLGVQVT DAPKDLLEQL KLDGGVLVQA VAPNSPASNA GIKAGDVISE
VNFIEVKSVK SLQKVAKELP KGKLLPIRFF SDGRPVFRTI KIAE
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