| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2245 |
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| Symbol | |
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| ID | 3967921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2851635 |
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| End bp | 2852501 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921336 |
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| Product | signal peptidase I |
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| Protein accession | YP_527717 |
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| Protein GI | 90021890 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00692178 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATATTA ATGTTCCTCT AATTTTGTTT TTATTGGTTG CTGGTACTGG GGTGGTAACC
CTTGTAGATA GAGTGCTATG GGCCGGTAAA CGCAAAGCTG CAATAGCAAA AGTGCAAGAA
AACTTCAGCG AACTAACCGA AGAACAAAAA GAGGAAGACA AGAAGTATCA AGCGGCAATA
GCCACTGCTT CTGCAGAGCC TAGCTATGTA GAGATATCAA AGTCCTTTTT TCCCTTATTA
GCACTCGTGT TTGTGGTTCG ATCTTTCATT ATTGAACCCT TCCAAATCCC GTCTGAATCG
ATGGTGCCAA CGCTAGAAGT AGGCGATTTC ATTGCAGTTA ATAAATTTAC CTACGGGATT
CGCTTGCCTA TACTGCGTAC TAAGGTGTTG GATATTAACG ACCCCGAGCG CGGCGATGTA
ATGGTGTTTT TTCCCCCTAA TGAAAAGCGC TACTTTATTA AGCGTGTTAT CGGGCTGCCG
GGCGACAAAG TAAGAATTCA AAACAACCGC TTGTTTATTA ATGGTGTGGA GGTTCCGCGC
GAACACGTAA GCGACGTGAT TCCAACAAAC CCCGGTGAAT TCTGCTTCAG TGTGGGCGGG
GTGTATAAAG TCATGGAAGA GACGATCGAT GGTAAAAAAC ACATCATGCG TAATTGCTCT
ACGCCTAGCT CAGCTGGCCT AGCTTACTCA AGTGTTGTGC CTGAAGGGCA TTACTTTATG
ATGGGCGATA ACCGCGATAA CAGTGGTGAC TCCCGTAAAT TTGGTATGGT TCCCGAGGAG
CGTATCGTCG GTAAAGCATT TGTAATTTGG ATGCACTGGG ATAAGTTTTT AAGTATTCCA
AGCTTTTCTC GAGCTGGCTC AATTTAG
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| Protein sequence | MDINVPLILF LLVAGTGVVT LVDRVLWAGK RKAAIAKVQE NFSELTEEQK EEDKKYQAAI
ATASAEPSYV EISKSFFPLL ALVFVVRSFI IEPFQIPSES MVPTLEVGDF IAVNKFTYGI
RLPILRTKVL DINDPERGDV MVFFPPNEKR YFIKRVIGLP GDKVRIQNNR LFINGVEVPR
EHVSDVIPTN PGEFCFSVGG VYKVMEETID GKKHIMRNCS TPSSAGLAYS SVVPEGHYFM
MGDNRDNSGD SRKFGMVPEE RIVGKAFVIW MHWDKFLSIP SFSRAGSI
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