| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2241 |
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| Symbol | |
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| ID | 3964845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2848836 |
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| End bp | 2849543 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921332 |
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| Product | DNA replication and repair protein RecO |
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| Protein accession | YP_527713 |
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| Protein GI | 90021886 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00610692 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACTT ACATGAGTGA TGATGTAACA GATAACGCCT ACATTCTTCA CTCACGTGCG
TACACGGATT CGCGAATAAT CATTGAGTTT TTTACAGAAA ATCATGGGCG CGTAGCCGGT
ATATTTAGGT TGCCAAGTAA AAAACGCCAC TTTAAACCCC AGCCTTTCAC ACTCTATACC
ATTCACTGGC GTTGGGGAGC TGAGCTTAAA ACCATTTTGT TTTTAGACCC CATTGCCAAC
GCCGAAGCTT TGGTGGGTAA AGCTTCCTAC TGTGGCCTAT ATCTTAATGA GCTAGTTTTG
AGGCTGTTAA GTAAGGAAGA CCCCAGCCCA GAAATATTTG CTGCGTATAA TGCAGCGCTT
AAAGGGTTAG TTGGTGGCCA AGAGCTAGAG GCGCCATTGC GGCATTTTGA GTTAGGTATT
CTTGCAGAGC TTGGTTACGC GGTTGATTTC GACTTCGACA GCTCTGGCAA TCCCATTGCT
GCATCAAACA GTGTTGCTTA CTTGTTTAAA GTGGGGGAGG GGTTTTCACT TTATTCTGTT
GGTCAAAAGC AAGTTGGGCA CGTATATAGC GGTGCTGTAT TGCGTGATAT ATCGGCTCGC
AACTTTTCTA ATACCCCAGT AAAAAAGGCT GCTAAGCAGA TTTGTCGGGC TTGCCTTGCG
CCGCTGTTGG GCGCAAAGCC ATTGAAATCC CGAGAGCTAT TTTTATAA
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| Protein sequence | MSTYMSDDVT DNAYILHSRA YTDSRIIIEF FTENHGRVAG IFRLPSKKRH FKPQPFTLYT
IHWRWGAELK TILFLDPIAN AEALVGKASY CGLYLNELVL RLLSKEDPSP EIFAAYNAAL
KGLVGGQELE APLRHFELGI LAELGYAVDF DFDSSGNPIA ASNSVAYLFK VGEGFSLYSV
GQKQVGHVYS GAVLRDISAR NFSNTPVKKA AKQICRACLA PLLGAKPLKS RELFL
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