| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2239 |
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| Symbol | cysM |
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| ID | 3964843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2844672 |
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| End bp | 2845562 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921330 |
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| Product | cysteine synthase B |
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| Protein accession | YP_527711 |
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| Protein GI | 90021884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00226796 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAATACC CCACAATAGA AGCAATTATT GGGAATACCC CCCTTGTTCG TTTACAGCGC
CTTCCTGGTT GCGAGAAAAA TACAGTTTTA GTTAAGTTGG AAGGTAATAA CCCTGGTGGG
TCCGTCAAAG ATCGGCCTGC ACTCTCGATG ATTCAGCGCG CAGAAGCCGC TGGGGCAATA
AAACCAGGCG ATACGATTAT TGAGGCTACC AGTGGTAATA CAGGCATAGC CTTAGCAATG
GTGGCTGCTG TTAAGGGCTA TAATATGATC CTTATTATGC CCGATCATAT GACAGAAGAG
CGCAAAGCGG CAATGACGGC TTATGGTGCT AAGCTTATCT TGGTGTCCAA AGCCGAGGGC
ATGGAGGGCG CAAGGGATTT GGCGCAGGCG ATGGCATCAC GCGGTGAAGG GGTGGTGTTA
GATCAATTTA GTAATACAGA TAATCCTCTT GCTCATTTTA CTGGCACTGG CCCAGAAATT
TGGCAGCAAA CCGGCGGTAC GGTTACTCAT TTTGTAAGCT CGATGGGTAC TACGGGCACC
ATAGTGGGCA CCTCTAAGTT CTTAAAAAGC CAAAACCCGA ATGTACAGGT GGTCGGTTTG
CAACCTGCAG AAGGAGCGGC TATTCCCGGT ATTAGAGCAT GGCCACAAGA GTATATGCCG
ACTATTTTTA CCGATGAAAA TATTGATAGC GTTGTGCAAA TGTCACAACA AAAAGCCGAA
GAAACCATGC GCCTTTTAGC AAAAAAAGAA GGTGTGTTTT GTGGTGTTTC TTCAGGCGGA
GCCGTTGCGG CAGCGTTAGA TATCGCCGCG AGTACAGAGG GCGCCGTTAT AGTAGCTATA
ATTTGCGATC GCGGAGATCG CTACTTATCG TCAGGTGTGT TTAATTCTTA A
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| Protein sequence | MEYPTIEAII GNTPLVRLQR LPGCEKNTVL VKLEGNNPGG SVKDRPALSM IQRAEAAGAI
KPGDTIIEAT SGNTGIALAM VAAVKGYNMI LIMPDHMTEE RKAAMTAYGA KLILVSKAEG
MEGARDLAQA MASRGEGVVL DQFSNTDNPL AHFTGTGPEI WQQTGGTVTH FVSSMGTTGT
IVGTSKFLKS QNPNVQVVGL QPAEGAAIPG IRAWPQEYMP TIFTDENIDS VVQMSQQKAE
ETMRLLAKKE GVFCGVSSGG AVAAALDIAA STEGAVIVAI ICDRGDRYLS SGVFNS
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